RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CEP41Q9BYV8 373 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 ARHGEF3Q9NR81 526 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 MRPL42Q9Y6G3 142 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 TNRC6CQ9HCJ0 1690 aaKnown RBP13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 IVDP26440 423 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 KRT76Q01546 638 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZNF699Q32M78 642 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 FAM102AQ5T9C2 384 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 CEP120Q8N960 986 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 TEKT4Q8WW24 435 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 GRAMD1AQ96CP6 724 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 MIS12Q9H081 205 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 JPH1Q9HDC5 661 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 STOML1Q9UBI4 398 aa13.96□□□□□ -0.18
TNFRSF21-201ENST00000296861 PTPRJQ12913 1337 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 hCG_2014768A0A024R1R8 64 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 CYB561D2O14569 222 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 LIASO43766 372 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 ICAM1P05362 532 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 PSAPP07602 524 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 GPC3P51654 580 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 FNBP1LQ5T0N5 605 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 TRIM50Q86XT4 487 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 USP6NLQ92738 828 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 VCXQ9H320 206 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 KCNN4O15554 427 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 USP1O94782 785 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 KCNA3P22001 575 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 SERPINB4P48594 390 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 CENPCQ03188 943 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 EMC2Q15006 297 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 MSS51Q4VC12 460 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 EGFL6Q8IUX8 553 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 MAP4K3Q8IVH8 894 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 UNC45BQ8IWX7 931 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 MAB21L3Q8N8X9 362 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 UTP4Q969X6 686 aaKnown RBP13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLC5A4Q9NY91 659 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 SCOCQ9UIL1 159 aa13.95□□□□□ -0.18
TNFRSF21-201ENST00000296861 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZBTB7AO95365 584 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 JAK3P52333 1124 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 ACTR2P61160 394 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 NOMO3P69849 1222 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 RCOR2Q8IZ40 523 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 JOSD2Q8TAC2 188 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 PPP1R13LQ8WUF5 828 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 POLIQ9UNA4 740 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 MYPNQ86TC9 1320 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 EDF1O60869 148 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 ENTPD3O75355 529 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 GM2AP17900 193 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLC30A9Q6PML9 568 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 TTLL6Q8N841 843 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SCG3Q8WXD2 468 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SH3GL3Q99963 347 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CYP26B1Q9NR63 512 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SMG5Q9UPR3 1016 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 ASMTLO95671 621 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CRADDP78560 199 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CHI3L2Q15782 390 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CYP1B1Q16678 543 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CISHQ9NSE2 258 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 PDE4DIPQ5VU43 2346 aa13.94□□□□□ -0.18
TNFRSF21-201ENST00000296861 YDJCA8MPS7 323 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 M0QYV0 167 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 NOP56O00567 594 aaKnown RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 DHX15O43143 795 aaKnown RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 MAP3K7O43318 606 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 STK10O94804 968 aaKnown RBP13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 SKIP12755 728 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 CCND2P30279 289 aa13.93□□□□□ -0.18
TNFRSF21-201ENST00000296861 ABCG1P45844 678 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms