RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 MED7O43513 233 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 VNN2O95498 520 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 SERPING1P05155 500 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ADH1AP07327 375 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 GSDMDP57764 484 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 NFE2Q16621 373 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 MEA1Q16626 185 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 PTPROQ16827 1216 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 C4orf50Q6ZRC1 276 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 SPATA2LQ8IUW3 424 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF606Q8WXB4 792 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 DDX1Q92499 740 aaKnown RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 HNRNPABQ99729 332 aaKnown RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF518BQ9C0D4 1074 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ZNHIT6Q9NWK9 470 aaKnown RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ABI2Q9NYB9 513 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 TSPAN16Q9UKR8 245 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
MRPL55-201ENST00000295008 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 CHD9Q3L8U1 2897 aa16.87■□□□□ 0.29
MRPL55-201ENST00000295008 MICAL2O94851 1124 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 MMEP08473 750 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-201ENST00000295008 CFHP08603 1231 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 CHRNB2P17787 502 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 KLRC2P26717 231 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 CDR2Q01850 454 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 CCDC173Q0VFZ6 552 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 STILQ15468 1287 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 CNGA2Q16280 664 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 LCLAT1Q6UWP7 414 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF571Q7Z3V5 609 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-201ENST00000295008 ADGRD2Q7Z7M1 963 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF677Q86XU0 584 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 PALB2Q86YC2 1186 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 OLIG1Q8TAK6 271 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 KRT82Q9NSB4 513 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 ARHGAP20Q9P2F6 1191 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 AFF4Q9UHB7 1163 aaKnown RBP16.86■□□□□ 0.29
MRPL55-201ENST00000295008 PCDHB5Q9Y5E4 795 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 PTPRDP23468 1912 aa16.86■□□□□ 0.29
MRPL55-201ENST00000295008 M0QYV0 167 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 CLASP2O75122 1294 aaKnown RBP16.85■□□□□ 0.29
MRPL55-201ENST00000295008 ABLIM3O94929 683 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 FECHP22830 423 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 BDNFP23560 247 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 FMO1Q01740 532 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 ADCY1Q08828 1119 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 CFAP221Q4G0U5 840 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 TPGS2Q68CL5 300 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 TTC30AQ86WT1 665 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 TTC9BQ8N6N2 239 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 ATAD1Q8NBU5 361 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 ZNF461Q8TAF7 563 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 SPPL2BQ8TCT7 592 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 C2orf15Q8WU43 125 aaKnown RBP16.85■□□□□ 0.29
MRPL55-201ENST00000295008 FUBP3Q96I24 572 aaKnown RBP eCLIP16.85■□□□□ 0.29
MRPL55-201ENST00000295008 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 CRISPLD1Q9H336 500 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 ABCB6Q9NP58 842 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 HESX1Q9UBX0 185 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 PCDHGC3Q9UN70 934 aa16.85■□□□□ 0.29
MRPL55-201ENST00000295008 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
MRPL55-201ENST00000295008 PER2O15055 1255 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 TGM5O43548 720 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 AP1G2O75843 785 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 GLUD1P00367 558 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 FAM200BP0CF97 657 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 CYP2F1P24903 491 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 CLCN4P51793 760 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 CACNA2D1P54289 1103 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 BCAT1P54687 386 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 CDK17Q00537 523 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
MRPL55-201ENST00000295008 ANKRD52Q8NB46 1076 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 UBA3Q8TBC4 463 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 SMARCD1Q96GM5 515 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 FAM161BQ96MY7 647 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 CHP1Q99653 195 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 PDCL3Q9H2J4 239 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
MRPL55-201ENST00000295008 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
MRPL55-201ENST00000295008 SEC24AO95486 1093 aa16.83■□□□□ 0.28
MRPL55-201ENST00000295008 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
MRPL55-201ENST00000295008 ATF2P15336 505 aa16.83■□□□□ 0.28
MRPL55-201ENST00000295008 EIF4A3P38919 411 aaKnown RBP16.83■□□□□ 0.28
MRPL55-201ENST00000295008 MAGEA11P43364 429 aa16.83■□□□□ 0.28
MRPL55-201ENST00000295008 BST2Q10589 180 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms