RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 CCDC22O60826 627 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 GOLGA7BQ2TAP0 167 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 DCAF4Q8WV16 495 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 FOXP1Q9H334 677 aaPredicted RBP12.91□□□□□ -0.34
SLX4-201ENST00000294008 SHOC2Q9UQ13 582 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
SLX4-201ENST00000294008 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
SLX4-201ENST00000294008 PSMD3O43242 534 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 CCNB2O95067 398 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 QARSP47897 775 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 RBBP8Q99708 897 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 VPS26AO75436 327 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 SNRNP27Q8WVK2 155 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 OMA1Q96E52 524 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 POLR1BQ9H9Y6 1135 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 SH3BP4Q9P0V3 963 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 C2orf81A6NN90 581 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 ALBP02768 609 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 HIST1H2ABP04908 130 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 KIAA1324Q6UXG2 1013 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 HIST3H2AQ7L7L0 130 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 HIST1H2ACQ93077 130 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 GLT1D1Q96MS3 346 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 THAP9Q9H5L6 903 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 THG1LQ9NWX6 298 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 TRIM49P0CI25 452 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TRIM49CP0CI26 452 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PDGFRAP16234 1089 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 CCL15Q16663 113 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TTLL9Q3SXZ7 439 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 UGT3A1Q6NUS8 523 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 CYP20A1Q6UW02 462 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PARGQ86W56 976 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 F5H5T6 163 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 TSPAN3O60637 253 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 DRAP1Q14919 205 aaPredicted RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 FBXO42Q6P3S6 717 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 HS6ST1O60243 411 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 LSP1P33241 339 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
SLX4-201ENST00000294008 COLEC11Q9BWP8 271 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 PACSIN1Q9BY11 444 aa12.9□□□□□ -0.34
SLX4-201ENST00000294008 NDUFA10O95299 355 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 VAV1P15498 845 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 AMPD2Q01433 879 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 POM121L1PQ3SYA9 428 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 EFL1Q7Z2Z2 1120 aaKnown RBP12.89□□□□□ -0.35
SLX4-201ENST00000294008 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 COA1Q9GZY4 146 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 PIGUQ9H490 435 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
SLX4-201ENST00000294008 KRT16P08779 473 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 MYBPC1Q00872 1141 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 LRRC49Q8IUZ0 686 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 CERKQ8TCT0 537 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 PAGE5Q96GU1 130 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 EFR3BQ9Y2G0 817 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 CYP26A1O43174 497 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
SLX4-201ENST00000294008 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 RHOT1Q8IXI2 618 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 WDR60Q8WVS4 1066 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms