RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 LRP5O75197 1615 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 PLIN4Q96Q06 1357 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 LIASO43766 372 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 KRT37O76014 449 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 KRT3P12035 628 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 JAK3P52333 1124 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 YARSP54577 528 aaKnown RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 NLRP11P59045 1033 aaKnown RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 ZNF200P98182 395 aaPredicted RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 GAD2Q05329 585 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 MYBPC2Q14324 1141 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 FIZ1Q96SL8 496 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 FCHO1O14526 889 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 CALB1P05937 261 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 SAT1P21673 171 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 NRLP54845 237 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 HADHBP55084 474 aaKnown RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 TTC7BQ86TV6 843 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 INPP5DQ92835 1189 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 MTBPQ96DY7 904 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 ANKRD36CQ5JPF3 1778 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 MEI4A8MW99 385 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 ADSSP30520 456 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 GPC3P51654 580 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.16
SCAF4-201ENST00000286835 PDE1BQ01064 536 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 KRT76Q01546 638 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 MORF4L2Q15014 288 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 CHI3L2Q15782 390 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 TFDP3Q5H9I0 405 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 WASHC2DQ5SRD0 308 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 MROH9Q5TGP6 573 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 CGB2Q6NT52 195 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 IZUMO2Q6UXV1 221 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 RASSF3Q86WH2 238 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 ABRAQ8N0Z2 381 aa14.02□□□□□ -0.16
SCAF4-201ENST00000286835 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.02□□□□□ -0.16
SCAF4-201ENST00000286835 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 CDH6P55285 790 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 GTF2BQ00403 316 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ZCCHC23Q6ZST2 131 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 PCGF5Q86SE9 256 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 C12orf50Q8NA57 414 aaPredicted RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ZNF483Q8TF39 744 aaPredicted RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 PPP1R36Q96LQ0 422 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 SYT11Q9BT88 431 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 MECRQ9BV79 373 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 MOV10L1Q9BXT6 1211 aaKnown RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 SNUPNO95149 360 aaKnown RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 FDX1P10109 184 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 GLRA2P23416 452 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ELK3P41970 407 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 RANBP1P43487 201 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 FAAP100Q0VG06 881 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ANO7Q6IWH7 933 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 TMEM161BQ8NDZ6 487 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 MCPH1Q8NEM0 835 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ZNF606Q8WXB4 792 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.17
SCAF4-201ENST00000286835 IRAK4Q9NWZ3 460 aa14.02□□□□□ -0.17
SCAF4-201ENST00000286835 ZBED1O96006 694 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 AP2B1P63010 937 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 SLC45A4Q5BKX6 768 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 OR6B2Q6IFH4 312 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 TRIM72Q6ZMU5 477 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 ALYREFQ86V81 257 aaKnown RBP14.01□□□□□ -0.17
SCAF4-201ENST00000286835 CLPTM1LQ96KA5 538 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 HOXC10Q9NYD6 342 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 MTO1Q9Y2Z2 717 aaKnown RBP14.01□□□□□ -0.17
SCAF4-201ENST00000286835 SYNJ2BP-COX16A0A087WUM0 186 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 ABL2P42684 1182 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 PARP6Q2NL67 630 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 POU5F2Q8N7G0 328 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 ATXN7L3BQ96GX2 97 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 COX16Q9P0S2 106 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 SEPT10Q9P0V9 454 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
SCAF4-201ENST00000286835 PSAPP07602 524 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 SLC34A1Q06495 639 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 PSMD6Q15008 389 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 RABGAP1LQ5R372 815 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 ATG16L1Q676U5 607 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 RSPH3Q86UC2 560 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 UTP4Q969X6 686 aaKnown RBP14.01□□□□□ -0.17
SCAF4-201ENST00000286835 FBXO40Q9UH90 709 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 INO80B-WBP1J3KQ70 363 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 CFLARO15519 480 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 TRPA1O75762 1119 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 CAP2P40123 477 aa14.01□□□□□ -0.17
SCAF4-201ENST00000286835 MMP14P50281 582 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms