RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SP8Q8IXZ3 490 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 ATG16L2Q8NAA4 619 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 CHST14Q8NCH0 376 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 UHMK1Q8TAS1 419 aaKnown RBP5.05□□□□□ -1.6
CD44-202ENST00000278385 ADAMTS15Q8TE58 950 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 FNIP1Q8TF40 1166 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 STON2Q8WXE9 905 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 HTRA1Q92743 480 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 RRP36Q96EU6 259 aaKnown RBP5.05□□□□□ -1.6
CD44-202ENST00000278385 TMEM209Q96SK2 561 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 C22orf23Q9BZE7 217 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
CD44-202ENST00000278385 VPS33BQ9H267 617 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 RANBP17Q9H2T7 1088 aaKnown RBP5.05□□□□□ -1.6
CD44-202ENST00000278385 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
CD44-202ENST00000278385 PREBQ9HCU5 417 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 NTMQ9P121 344 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 ASH2LQ9UBL3 628 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 VPS28Q9UK41 221 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 ITGB1BP2Q9UKP3 347 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 AGTPBP1Q9UPW5 1226 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
CD44-202ENST00000278385 PLEKHG2Q9H7P9 1386 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 KIF7Q2M1P5 1343 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CCDC66A2RUB6 948 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PI4KAP2A4QPH2 592 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 GOLGA6L3A6NEY3 463 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PES1O00541 588 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 DAPK3O43293 454 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TGDSO95455 350 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ALDH2P05091 517 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TSHRP16473 764 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 IGFBP6P24592 240 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 ABCD1P33897 745 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 GJA4P35212 333 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 HOXD13P35453 343 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 STAT5AP42229 794 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PHKA1P46020 1223 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ITGA8P53708 1063 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CSE1LP55060 971 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 HMGN5P82970 282 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 ALDH6A1Q02252 535 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 GRIN1Q05586 938 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TMED1Q13445 227 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 MPEG1Q2M385 716 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PGS1Q32NB8 556 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 C5orf22Q49AR2 442 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 ZNF362Q5T0B9 420 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PRAMEF18Q5VWM3 479 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 BTBD8Q5XKL5 378 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TRIM68Q6AZZ1 485 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CPOQ8IVL8 374 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CCAR2Q8N163 923 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 KYQ8NBH2 561 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ARRDC4Q8NCT1 418 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 HERVK_113Q902F9 699 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ANP32BQ92688 251 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 DACT3Q96B18 629 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 APIPQ96GX9 242 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CNPPD1Q9BV87 410 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ZCCHC4Q9H5U6 513 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 RIC8BQ9NVN3 520 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 HAUS2Q9NVX0 235 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 OXSMQ9NWU1 459 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 TRMT1Q9NXH9 659 aaKnown RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 TFCP2L1Q9NZI6 479 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 H2AFY2Q9P0M6 372 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 LRFN1Q9P244 771 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 RABL2AQ9UBK7 228 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 CCNL1Q9UK58 526 aaPredicted RBP5.04□□□□□ -1.6
CD44-202ENST00000278385 ZNF711Q9Y462 761 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 SNX13Q9Y5W8 968 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 LRRC37A3O60309 1634 aa5.04□□□□□ -1.6
CD44-202ENST00000278385 PEAK1Q9H792 1746 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 MEGF6O75095 1541 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PTPDC1A2A3K4 754 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 POM121BA6NF01 834 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 ERVV-2B6SEH9 535 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 ARVCFO00192 962 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 ACKR2O00590 384 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 AKR1B10O60218 316 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PLA2G6O60733 806 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 GOSR1O95249 250 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 CKMP06732 381 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 ENO2P09104 434 aaPredicted RBP5.03□□□□□ -1.6
CD44-202ENST00000278385 THEGLP0DJG4 465 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 KRT10P13645 584 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 PDE6AP16499 860 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 BMP7P18075 431 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 IL11P20809 199 aa5.03□□□□□ -1.6
CD44-202ENST00000278385 AGXTP21549 392 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms