RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SZT2Q5T011 3432 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 A0A0B4J269 797 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 K7ERI5 159 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-201ENST00000277198 LIASO43766 372 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 ADAMTS4O75173 837 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 ATG7O95352 703 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 SYN1P17600 705 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 ARL2P36404 184 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 ZNF132P52740 706 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 MORF4L2Q15014 288 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 LRRC14Q15048 493 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 RGS9BPQ6ZS82 235 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 GSTA5Q7RTV2 222 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 RBBP8NLQ8NC74 664 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-201ENST00000277198 MAML1Q92585 1016 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
C9orf3-201ENST00000277198 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-201ENST00000277198 IMPG2Q9BZV3 1241 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
C9orf3-201ENST00000277198 ABCF3Q9NUQ8 709 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 KLHL14Q9P2G3 628 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
C9orf3-201ENST00000277198 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 TMEM191CA6NGB0 347 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 PRPF4O43172 522 aaKnown RBP eCLIP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 UBOX5O94941 541 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 TMEM191BP0C7N4 346 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ICAM3P32942 547 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 MGARPQ8TDB4 240 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NIFKQ9BYG3 293 aaKnown RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NOD2Q9HC29 1040 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 DDX56Q9NY93 547 aaKnown RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 FETUBQ9UGM5 382 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 SMG5Q9UPR3 1016 aaKnown RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 RASA4BC9J798 803 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 RASA4O43374 803 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ALADP13716 330 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 CREB1P16220 341 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 SMPD1P17405 629 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 RFC5P40937 340 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ACOT2P49753 483 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NCALDP61601 193 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 MPP2Q14168 576 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 P3H1Q32P28 736 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ZPBP2Q6X784 338 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 CYP4X1Q8N118 509 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ALLCQ8N6M5 410 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 UBR7Q8N806 425 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NIPA2Q8N8Q9 360 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ANKRD42Q8N9B4 389 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 SLC7A3Q8WY07 619 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 NKD2Q969F2 451 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-201ENST00000277198 SLITRK1Q96PX8 696 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 MSTO1Q9BUK6 570 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 CTNNAL1Q9UBT7 734 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
C9orf3-201ENST00000277198 ASB14A6NK59 587 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 ATP5HO75947 161 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 CALCAP01258 141 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 OATP04181 439 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 ITGAVP06756 1048 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 GLRA2P23416 452 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 BEX3Q00994 111 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 NCOA4Q13772 614 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 MTERF2Q49AM1 385 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 FAM133BQ5BKY9 247 aaKnown RBP13.59□□□□□ -0.23
C9orf3-201ENST00000277198 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
C9orf3-201ENST00000277198 SPOPLQ6IQ16 392 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 SRRM1Q8IYB3 904 aaKnown RBP13.59□□□□□ -0.23
C9orf3-201ENST00000277198 SLC24A2Q9UI40 661 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 MCM8Q9UJA3 840 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 SHOC2Q9UQ13 582 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 STARD13Q9Y3M8 1113 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
C9orf3-201ENST00000277198 EXOC1LA0A1B0GW35 172 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TCRBV5S1A1TA0A578 114 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ALOX15BO15296 676 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ASS1P00966 412 aaKnown RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CDH5P33151 784 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 VPS41P49754 854 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SURF1Q15526 300 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 LMBRD2Q68DH5 695 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CCSAPQ6IQ19 270 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms