RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CCDC186Q7Z3E2 898 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 ZNF677Q86XU0 584 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 ZNF461Q8TAF7 563 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 OLIG1Q8TAK6 271 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 SLC2A14Q8TDB8 520 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 MRPL38Q96DV4 380 aaKnown RBP18.27■□□□□ 0.51
SKP2-201ENST00000274254 PPP1R9BQ96SB3 815 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 EMILIN2Q9BXX0 1053 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 B3GNT5Q9BYG0 378 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 HAUS4Q9H6D7 363 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.51
SKP2-201ENST00000274254 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.51
SKP2-201ENST00000274254 MED7O43513 233 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 VNN2O95498 520 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 ADH1AP07327 375 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 SKILP12757 684 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 CHRNB2P17787 502 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 CA8P35219 290 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 ARPP19P56211 112 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 CDR2Q01850 454 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 CCDC173Q0VFZ6 552 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 PTPROQ16827 1216 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 CFAP221Q4G0U5 840 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 TPGS2Q68CL5 300 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 LCLAT1Q6UWP7 414 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 RNF19BQ6ZMZ0 732 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 C4orf50Q6ZRC1 276 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 GLYCTKQ8IVS8 523 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 C2orf15Q8WU43 125 aaKnown RBP18.26■□□□□ 0.51
SKP2-201ENST00000274254 SLC20A1Q8WUM9 679 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 FUBP3Q96I24 572 aaKnown RBP eCLIP18.26■□□□□ 0.51
SKP2-201ENST00000274254 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 ZNHIT6Q9NWK9 470 aaKnown RBP18.26■□□□□ 0.51
SKP2-201ENST00000274254 TSPAN16Q9UKR8 245 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 PCDHGC3Q9UN70 934 aa18.26■□□□□ 0.51
SKP2-201ENST00000274254 MTMR11A4FU01 709 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 CLDN5O00501 218 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 PLEKP08567 350 aaPredicted RBP18.25■□□□□ 0.51
SKP2-201ENST00000274254 CYP27A1Q02318 531 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 PKDCCQ504Y2 493 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 ZNF571Q7Z3V5 609 aaPredicted RBP18.25■□□□□ 0.51
SKP2-201ENST00000274254 PGLYRP2Q96PD5 576 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 ZNF518BQ9C0D4 1074 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 ABCB6Q9NP58 842 aa18.25■□□□□ 0.51
SKP2-201ENST00000274254 AFF4Q9UHB7 1163 aaKnown RBP18.25■□□□□ 0.51
SKP2-201ENST00000274254 MICAL2O94851 1124 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 C1RP00736 705 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 MMEP08473 750 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 CFHP08603 1231 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 ATF2P15336 505 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 CDR1P51861 262 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 FMO1Q01740 532 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 GRIN2CQ14957 1233 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 TAF3Q5VWG9 929 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 LILRA6Q6PI73 481 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 FAM35AQ86V20 835 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 SPATA2LQ8IUW3 424 aaPredicted RBP18.24■□□□□ 0.51
SKP2-201ENST00000274254 ANKRD52Q8NB46 1076 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 ATAD1Q8NBU5 361 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 SPPL2BQ8TCT7 592 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 CHP1Q99653 195 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 AGPAT1Q99943 283 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 ABI2Q9NYB9 513 aaPredicted RBP18.24■□□□□ 0.51
SKP2-201ENST00000274254 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
SKP2-201ENST00000274254 SSU72P8A0A1W2PR75 194 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 KLRC2P26717 231 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 ADORA2BP29275 332 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 ADCY1Q08828 1119 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 MAPK8IP2Q13387 824 aaPredicted RBP18.23■□□□□ 0.51
SKP2-201ENST00000274254 GOLGA7BQ2TAP0 167 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
SKP2-201ENST00000274254 ZNF697Q5TEC3 545 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TTC30AQ86WT1 665 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TMEM139Q8IV31 216 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 SMARCD1Q96GM5 515 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 MED10Q9BTT4 135 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 LHX5Q9H2C1 402 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 CRISPLD1Q9H336 500 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 PRDM12Q9H4Q4 367 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 LMCD1Q9NZU5 365 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 HSFX1Q9UBD0 423 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 MAFFQ9ULX9 164 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TGM5O43548 720 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 CLASP2O75122 1294 aaKnown RBP18.23■□□□□ 0.51
SKP2-201ENST00000274254 BDNFP23560 247 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
SKP2-201ENST00000274254 MAGEA11P43364 429 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 CLCN4P51793 760 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 GPR153Q6NV75 609 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 PALB2Q86YC2 1186 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 DUSP16Q9BY84 665 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 RHOBTB2Q9BYZ6 727 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 CSNK1G1Q9HCP0 422 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 KRT82Q9NSB4 513 aa18.23■□□□□ 0.51
SKP2-201ENST00000274254 PRRC2BQ5JSZ5 2229 aaKnown RBP18.22■□□□□ 0.51
SKP2-201ENST00000274254 ATP8B3O60423 1300 aa18.22■□□□□ 0.51
SKP2-201ENST00000274254 MYH10P35580 1976 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms