RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ATG2BQ96BY7 2078 aa9.66□□□□□ -0.86
TPM3-201ENST00000271850 CNOT1A5YKK6 2376 aaKnown RBP9.66□□□□□ -0.86
TPM3-201ENST00000271850 FRYQ5TBA9 3013 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 KPNA7A9QM74 516 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 TBCAO75347 108 aaKnown RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 RETP07949 1114 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 SCP2P22307 547 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 ACAT1P24752 427 aaKnown RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 POLR2BP30876 1174 aaKnown RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 PXNP49023 591 aaPredicted RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 MCM2P49736 904 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 KPNA1P52294 538 aaPredicted RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 NLRP12P59046 1061 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 ZXDBP98169 803 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 LMNB2Q03252 620 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 SIM2Q14190 667 aaPredicted RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 TMEM196Q5HYL7 178 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 HEATR6Q6AI08 1181 aaKnown RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 ARMCX5Q6P1M9 558 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 PRR23BQ6ZRT6 265 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 LIMS2Q7Z4I7 341 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 BRAPQ7Z569 592 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 LONP2Q86WA8 852 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 BRSK2Q8IWQ3 736 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 YAF2Q8IY57 180 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 CMTM8Q8IZV2 173 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 PI4K2AQ9BTU6 479 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 EBF3Q9H4W6 596 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 SEMA4GQ9NTN9 838 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 SMC3Q9UQE7 1217 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.86
TPM3-201ENST00000271850 MYO16Q9Y6X6 1858 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 KIAA1549LQ6ZVL6 1849 aa9.65□□□□□ -0.86
TPM3-201ENST00000271850 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 GOLGA8IPA6NC78 632 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 GOLGA8JA6NMD2 632 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 PRR5-ARHGAP8B1AHC4 643 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 KRT37O76014 449 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 EGFP01133 1207 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 ITGB3P05106 788 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 KRT18P05783 430 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 CYP2F1P24903 491 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 CDC25CP30307 473 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 HOXA6P31267 233 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 HOXD13P35453 343 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 TUFMP49411 452 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 NRLP54845 237 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 ARHGAP8P85298 464 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 POU5F1Q01860 360 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 LRRC32Q14392 662 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 CCDC6Q16204 474 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 DDR2Q16832 855 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 DGKKQ5KSL6 1271 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 L1TD1Q5T7N2 865 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 LMBRD2Q68DH5 695 aaPredicted RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 PRR23CQ6ZRP0 262 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 ITIH5Q86UX2 942 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 WDR5BQ86VZ2 330 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 FAM160A2Q8N612 972 aaPredicted RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 MAB21L3Q8N8X9 362 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 SPPL2BQ8TCT7 592 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 LEO1Q8WVC0 666 aaPredicted RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 KBTBD7Q8WVZ9 684 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 FAM213AQ9BRX8 229 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 RTKNQ9BST9 563 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 DSEQ9UL01 958 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 SRPRBQ9Y5M8 271 aaKnown RBP9.64□□□□□ -0.87
TPM3-201ENST00000271850 GREB1Q4ZG55 1949 aa9.64□□□□□ -0.87
TPM3-201ENST00000271850 SPAG17Q6Q759 2223 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 PTPRDP23468 1912 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 GABRDO14764 452 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 SLC30A4O14863 429 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 LRP3O75074 770 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 NOL4O94818 638 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 FGF19O95750 216 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 BMP15O95972 392 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 PAX3P23760 479 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 USP4Q13107 963 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 RUNX3Q13761 415 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 ZNF77Q15935 545 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 CSRP2Q16527 193 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 SOWAHAQ2M3V2 549 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 ARHGAP15Q53QZ3 475 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 SLFN12LQ6IEE8 588 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 OR5B17Q8NGF7 314 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms