RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 TRADDQ15628 312 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 KCNA10Q16322 511 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 XYLT1Q86Y38 959 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 CCDC50Q8IVM0 306 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 RCOR2Q8IZ40 523 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 ARL8AQ96BM9 186 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 LRRC45Q96CN5 670 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 CFHR5Q9BXR6 569 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 KLK14Q9P0G3 267 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
SF3B4-201ENST00000271628 PPEF2O14830 753 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 TRIM66O15016 1216 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 GPR182O15218 404 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 AOC2O75106 756 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 TAF6P49848 677 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 SNX16P57768 344 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 COPS2P61201 443 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 ACAP1Q15027 740 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 SV2CQ496J9 727 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 DUPD1Q68J44 220 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 CAPNS2Q96L46 248 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 RNF186Q9NXI6 227 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 DDX56Q9NY93 547 aaKnown RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 FAM153AQ9UHL3 310 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 ST3GAL5Q9UNP4 418 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 TCRBV7S2A1N4TA0A589 114 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 F8VP50 259 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 ECHS1P30084 290 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 RFC1P35251 1148 aaPredicted RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 PTGIRP43119 386 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 GNGT1P63211 74 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 ZNF252P-AS1Q0IIN9 211 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 SOWAHAQ2M3V2 549 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 POLNQ7Z5Q5 900 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 DDX42Q86XP3 938 aaKnown RBP eCLIP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 BCAS4Q8TDM0 211 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 SLCO2A1Q92959 643 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 MCRS1Q96EZ8 462 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 SENP6Q9GZR1 1112 aaPredicted RBP16.14■□□□□ 0.17
SF3B4-201ENST00000271628 TMEM51Q9NW97 253 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 HESX1Q9UBX0 185 aa16.14■□□□□ 0.17
SF3B4-201ENST00000271628 A8MXQ7 604 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 GOLGA8SH3BPF8 625 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 EBAG9O00559 213 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 KRT14P02533 472 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 SETSIPP0DME0 302 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 PSMA2P25787 234 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 CCND3P30281 292 aaPredicted RBP16.13■□□□□ 0.17
SF3B4-201ENST00000271628 LRPAP1P30533 357 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
SF3B4-201ENST00000271628 OGDHQ02218 1023 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
SF3B4-201ENST00000271628 DAB2IPQ5VWQ8 1189 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
SF3B4-201ENST00000271628 TTC27Q6P3X3 843 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 UBA3Q8TBC4 463 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 GRK7Q8WTQ7 553 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 TRIM51Q9BSJ1 452 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 OSBPL8Q9BZF1 889 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 SLC38A7Q9NVC3 462 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 SRRDQ9UH36 339 aa16.13■□□□□ 0.17
SF3B4-201ENST00000271628 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 CABYRO75952 493 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 CHRNA1P02708 482 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ERBB2P04626 1255 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 FAM163BP0C2L3 166 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 KLF1Q13351 362 aaPredicted RBP16.12■□□□□ 0.17
SF3B4-201ENST00000271628 HADHQ16836 314 aaKnown RBP16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
SF3B4-201ENST00000271628 KDM7AQ6ZMT4 941 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 RNF180Q86T96 592 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ACOT1Q86TX2 421 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 CRYBG2Q8N1P7 616 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 C12orf29Q8N999 325 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 APPL2Q8NEU8 664 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 PIK3R5Q8WYR1 880 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 DPH5Q9H2P9 285 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 FAM105AQ9NUU6 356 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 CAPN15O75808 1086 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ECEL1O95672 775 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 KRT7P08729 469 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 RALAP11233 206 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ELNP15502 786 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
SF3B4-201ENST00000271628 MGAT3Q09327 533 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 PTGISQ16647 500 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 ARHGAP17Q68EM7 881 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
SF3B4-201ENST00000271628 SYDE1Q6ZW31 735 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms