RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 NIPA2Q8N8Q9 360 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 FAM76AQ8TAV0 307 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 PLEKHA5Q9HAU0 1116 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 SMIM28A0A1B0GU29 152 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 C17orf102A2RUQ5 167 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 PSMA2P25787 234 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 CHKAP35790 457 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 GABRB2P47870 512 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 FAM182AQ5T1J6 154 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 CXCL17Q6UXB2 119 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 HAUS1Q96CS2 278 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 MCRS1Q96EZ8 462 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 ZWILCHQ9H900 591 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 ZFYVE28Q9HCC9 887 aa24.42■■□□□ 1.5
RAB40B-201ENST00000269347 E5RJQ4 531 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 ATF7P17544 494 aaPredicted RBP24.41■■□□□ 1.5
RAB40B-201ENST00000269347 PPP1R7Q15435 360 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 SPOCD1Q6ZMY3 1216 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 FAM228AQ86W67 206 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 NT5DC4Q86YG4 428 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 GOLGA6L1Q8N7Z2 621 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 PLVAPQ9BX97 442 aa24.41■■□□□ 1.5
RAB40B-201ENST00000269347 SAE1Q9UBE0 346 aaPredicted RBP24.41■■□□□ 1.5
RAB40B-201ENST00000269347 GRAP2O75791 330 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 CAPN2P17655 700 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 LMO2P25791 158 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 AFF1P51825 1210 aaKnown RBP24.4■■□□□ 1.5
RAB40B-201ENST00000269347 PMF1Q6P1K2 205 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 SESTD1Q86VW0 696 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 NT5C1AQ9BXI3 368 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 TRIM6Q9C030 488 aaPredicted RBP24.4■■□□□ 1.5
RAB40B-201ENST00000269347 CALCOCO1Q9P1Z2 691 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 DNPEPQ9ULA0 475 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 HMGCRP04035 888 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 CYBAP13498 195 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 CDKN2BP42772 138 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 ATP1A2P50993 1020 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 PIGHQ14442 188 aaPredicted RBP24.4■■□□□ 1.5
RAB40B-201ENST00000269347 GOLGA7BQ2TAP0 167 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 PKDCCQ504Y2 493 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 RHBDF2Q6PJF5 856 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 LCLAT1Q6UWP7 414 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 FAM183BPQ6ZVS7 135 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 UHMK1Q8TAS1 419 aaKnown RBP24.4■■□□□ 1.5
RAB40B-201ENST00000269347 KBTBD7Q8WVZ9 684 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 PEBP4Q96S96 227 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 C10orf88Q9H8K7 445 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 DNAJC17Q9NVM6 304 aaKnown RBP24.4■■□□□ 1.5
RAB40B-201ENST00000269347 STRIP2Q9ULQ0 834 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 IPPQ9Y573 584 aa24.4■■□□□ 1.5
RAB40B-201ENST00000269347 hCG_1818297A0A087WSY0 165 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 ETS1P14921 441 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 GSCP56915 257 aaPredicted RBP24.39■■□□□ 1.5
RAB40B-201ENST00000269347 ZFYVE27Q5T4F4 411 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 FOXR1Q6PIV2 292 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 LRIG3Q6UXM1 1119 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 SOCS4Q8WXH5 440 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 CCDC114Q96M63 670 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 PARP2Q9UGN5 583 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 PCSK1NQ9UHG2 260 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 Q9Y3F1 56 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 TLL2Q9Y6L7 1015 aa24.39■■□□□ 1.5
RAB40B-201ENST00000269347 LRRD1A4D1F6 860 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 PIRO00625 290 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 ZSCAN5DPP0CG00 497 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 P4HA1P13674 534 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 AKR1A1P14550 325 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 PMS2P54278 862 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 PTK6Q13882 451 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 GDF6Q6KF10 455 aaPredicted RBP24.39■■□□□ 1.49
RAB40B-201ENST00000269347 CYP4V2Q6ZWL3 525 aaPredicted RBP24.39■■□□□ 1.49
RAB40B-201ENST00000269347 RCOR2Q8IZ40 523 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 C7orf31Q8N865 590 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 ATP6V1G3Q96LB4 118 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 ZFP42Q96MM3 310 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 SYNCQ9H7C4 482 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 DERAQ9Y315 318 aa24.39■■□□□ 1.49
RAB40B-201ENST00000269347 YARSP54577 528 aaKnown RBP24.38■■□□□ 1.49
RAB40B-201ENST00000269347 ZNF268Q14587 947 aaPredicted RBP24.38■■□□□ 1.49
RAB40B-201ENST00000269347 CCNG2Q16589 344 aa24.38■■□□□ 1.49
RAB40B-201ENST00000269347 C15orf59Q2T9L4 293 aaPredicted RBP24.38■■□□□ 1.49
RAB40B-201ENST00000269347 LRRC38Q5VT99 294 aa24.38■■□□□ 1.49
RAB40B-201ENST00000269347 KHSRPQ92945 711 aaKnown RBP eCLIP24.38■■□□□ 1.49
RAB40B-201ENST00000269347 CENPHQ9H3R5 247 aa24.38■■□□□ 1.49
RAB40B-201ENST00000269347 CRYBB1P53674 252 aaPredicted RBP24.37■■□□□ 1.49
RAB40B-201ENST00000269347 HNRNPH2P55795 449 aaKnown RBP24.37■■□□□ 1.49
RAB40B-201ENST00000269347 MYO1EQ12965 1108 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 NBPF20Q3BBV1 942 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 GNASQ5JWF2 1037 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 FAM102AQ5T9C2 384 aaPredicted RBP24.37■■□□□ 1.49
RAB40B-201ENST00000269347 B3GNT5Q9BYG0 378 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 ASIC3Q9UHC3 531 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 GRIN2DO15399 1336 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 PTGESO14684 152 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 TAP1Q03518 808 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 SLC29A2Q14542 456 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 XKR4Q5GH76 650 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 LRRC31Q6UY01 552 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 ATL2Q8NHH9 583 aa24.37■■□□□ 1.49
RAB40B-201ENST00000269347 RABEP2Q9H5N1 569 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms