RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 HNRNPABQ99729 332 aaKnown RBP14.92□□□□□ -0.02
SS18-201ENST00000269137 PDE2AO00408 941 aaPredicted RBP14.91□□□□□ -0.02
SS18-201ENST00000269137 KCNK3O14649 394 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 DDX3YO15523 660 aaKnown RBP14.91□□□□□ -0.02
SS18-201ENST00000269137 B4GALT3O60512 393 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 PROSCO94903 275 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 PTPN1P18031 435 aaKnown RBP14.91□□□□□ -0.02
SS18-201ENST00000269137 ITIH3Q06033 890 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 RSRC2Q7L4I2 434 aaKnown RBP14.91□□□□□ -0.02
SS18-201ENST00000269137 XYLT1Q86Y38 959 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 NPAS4Q8IUM7 802 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 CASD1Q96PB1 797 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 SLC4A5Q9BY07 1137 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 TRIM7Q9C029 511 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 SYNCQ9H7C4 482 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 DDX43Q9NXZ2 648 aaKnown RBP14.91□□□□□ -0.02
SS18-201ENST00000269137 LRFN2Q9ULH4 789 aa14.91□□□□□ -0.02
SS18-201ENST00000269137 MICAL3Q7RTP6 2002 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 SIGLEC16A6NMB1 481 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 TMEM110-MUSTN1A8MSY1 372 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 RRP9O43818 475 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 ERBB2P04626 1255 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 TYMPP19971 482 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 PCSK1P29120 753 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 MAN1A1P33908 653 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 BCAT1P54687 386 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 SNX16P57768 344 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 PSMC1P62191 440 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 RNASELQ05823 741 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 BST2Q10589 180 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 CFAP221Q4G0U5 840 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 CYP4A22Q5TCH4 519 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 CNKSR3Q6P9H4 555 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 DEFB128Q7Z7B8 93 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 TMEM110Q86TL2 294 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 METTL23Q86XA0 190 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 VWCEQ96DN2 955 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 MCRS1Q96EZ8 462 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 FAM193BQ96PV7 902 aaPredicted RBP14.9□□□□□ -0.02
SS18-201ENST00000269137 LPIN3Q9BQK8 851 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 SELENOOQ9BVL4 669 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 CARD9Q9H257 536 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 CYLDQ9NQC7 956 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 IP6K2Q9UHH9 426 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
SS18-201ENST00000269137 KIAA0355O15063 1070 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 SPOPO43791 374 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 CCDC130P13994 396 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 CTNNA2P26232 953 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PAFAH1B1P43034 410 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 BRCC3P46736 316 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 RPL34P49207 117 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 DNA2P51530 1060 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PDE4CQ08493 712 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 IKBKEQ14164 716 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PTPROQ16827 1216 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 UBXN4Q92575 508 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 SYT15Q9BQS2 421 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 TJP2Q9UDY2 1190 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 TIMM13Q9Y5L4 95 aaPredicted RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 I3L4J1 428 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 ATP2C2O75185 946 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 TIMP1P01033 207 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 ITGB1P05556 798 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 KRT3P12035 628 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 ACAT1P24752 427 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 PEX5P50542 639 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 PLCB3Q01970 1234 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 PAN2Q504Q3 1202 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 CCDC181Q5TID7 509 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 DCUN1D2Q6PH85 259 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 FUKQ8N0W3 1084 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 RASGEF1CQ8N431 466 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 ACTRT1Q8TDG2 376 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 FNIP1Q8TF40 1166 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 ACBD6Q9BR61 282 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 MRPL9Q9BYD2 267 aaKnown RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 CRTAC1Q9NQ79 661 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 TTC7AQ9ULT0 858 aaPredicted RBP14.89□□□□□ -0.03
SS18-201ENST00000269137 PCDHA3Q9Y5H8 950 aa14.89□□□□□ -0.03
SS18-201ENST00000269137 TSC2P49815 1807 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 ADORA2BP29275 332 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 PAQR9Q6ZVX9 377 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 TSC1Q92574 1164 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 ALG3Q92685 438 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 HSFY1Q96LI6 401 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 MCEEQ96PE7 176 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms