RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 INPPL1O15357 1258 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 MICAL2O94851 1124 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 THP07101 528 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 RPL9P32969 192 aaKnown RBP16.24■□□□□ 0.19
COPS3-201ENST00000268717 SOX4Q06945 474 aaPredicted RBP16.24■□□□□ 0.19
COPS3-201ENST00000268717 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 PPP2R5EQ16537 467 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 PPP1R15BQ5SWA1 713 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 ARHGAP17Q68EM7 881 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 GSTCDQ8NEC7 633 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.24■□□□□ 0.19
COPS3-201ENST00000268717 PLVAPQ9BX97 442 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 RBM12Q9NTZ6 932 aaKnown RBP16.24■□□□□ 0.19
COPS3-201ENST00000268717 RNF19AQ9NV58 838 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 CHORDC1Q9UHD1 332 aaPredicted RBP16.24■□□□□ 0.19
COPS3-201ENST00000268717 IP6K2Q9UHH9 426 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 TMEM191CA6NGB0 347 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ERLIN1O75477 346 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 RHOXF2BP0C7M4 288 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 GPD2P43304 727 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 LILRA4P59901 499 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ZNF268Q14587 947 aaPredicted RBP16.23■□□□□ 0.19
COPS3-201ENST00000268717 PTPN20Q4JDL3 420 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 DCAF12L1Q5VU92 463 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 DNAJC24Q6P3W2 148 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 CNKSR3Q6P9H4 555 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 CRYBG2Q8N1P7 616 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ALG3Q92685 438 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 RHOXF2Q9BQY4 288 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 MRPL45Q9BRJ2 306 aaKnown RBP16.23■□□□□ 0.19
COPS3-201ENST00000268717 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 EHD2Q9NZN4 543 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 SCN1AP35498 2009 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 M0QYV0 167 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 PSTPIP1O43586 416 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
COPS3-201ENST00000268717 DNAJB2P25686 324 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 MLH1P40692 756 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 CLCN6P51797 869 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 RWDD2BP57060 319 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 NIPA2Q8N8Q9 360 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 APPL2Q8NEU8 664 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 SPATA18Q8TC71 538 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 STK32AQ8WU08 396 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 KBTBD7Q8WVZ9 684 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 BTBD6Q96KE9 485 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 PNKPQ96T60 521 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 RSAD1Q9HA92 442 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 SMARCAL1Q9NZC9 954 aa16.23■□□□□ 0.19
COPS3-201ENST00000268717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
COPS3-201ENST00000268717 COL6A3P12111 3177 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 TMEM265A0A087WTH1 108 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 SPTLC1O15269 473 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 MGEA5O60502 916 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 HUS1O60921 280 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
COPS3-201ENST00000268717 PBX2P40425 430 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
COPS3-201ENST00000268717 PDCLQ13371 301 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 PTPROQ16827 1216 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 TCTN1Q2MV58 587 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 SEL1L2Q5TEA6 688 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 TMCO3Q6UWJ1 677 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
COPS3-201ENST00000268717 KRT35Q92764 455 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 GAD1Q99259 594 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 EPC1Q9H2F5 836 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
COPS3-201ENST00000268717 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 TSPAN16Q9UKR8 245 aa16.22■□□□□ 0.19
COPS3-201ENST00000268717 CHD9Q3L8U1 2897 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 A8MXQ7 604 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 ATP8B1O43520 1251 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 ATP2A2P16615 1042 aaKnown RBP16.21■□□□□ 0.19
COPS3-201ENST00000268717 TNFRSF8P28908 595 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 SNX16P57768 344 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 LRRC38Q5VT99 294 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
COPS3-201ENST00000268717 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 UROC1Q96N76 676 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 ADAM2Q99965 735 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 FTHL17Q9BXU8 183 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms