RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PDE12Q6L8Q7 609 aaKnown RBP8.17□□□□□ -1.1
USP3-201ENST00000268049 ARHGEF26Q96DR7 871 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 TGS1Q96RS0 853 aaKnown RBP8.17□□□□□ -1.1
USP3-201ENST00000268049 KRT82Q9NSB4 513 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 PSD3Q9NYI0 1048 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 HACD3Q9P035 362 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 ZNF510Q9Y2H8 683 aa8.17□□□□□ -1.1
USP3-201ENST00000268049 H2AFYO75367 372 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP3-201ENST00000268049 DNTTP04053 509 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 KRT1P04264 644 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CAPN12Q6ZSI9 719 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 RAPH1Q70E73 1250 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ARHGAP22Q7Z5H3 698 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 NECTIN4Q96NY8 510 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SH3GL1Q99961 368 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ZWILCHQ9H900 591 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 KLHL8Q9P2G9 620 aaPredicted RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 UBXN8O00124 270 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PYGLP06737 847 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 KRT4P19013 534 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 EHHADHQ08426 723 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 NCAPHQ15003 741 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 INAQ16352 499 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 KHDRBS2Q5VWX1 349 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 KLHL35Q6PF15 583 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 OTOP2Q7RTS6 562 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 RBM23Q86U06 439 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 ICA1LQ8NDH6 482 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ZNF668Q96K58 619 aaPredicted RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 HAPLN3Q96S86 360 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 EMILIN3Q9NT22 766 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TLK1Q9UKI8 766 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SLC30A1Q9Y6M5 507 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ABHD14A-ACY1A0A1B0GW23 586 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 POC1B-GALNT4F8VUJ3 575 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 OCM2P0CE71 109 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 OCMP0CE72 109 aaPredicted RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 PSMA2P25787 234 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 VEGFBP49765 207 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TMEM259Q4ZIN3 620 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TRMT10CQ7L0Y3 403 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 CHMP1BQ7LBR1 199 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 LONP2Q86WA8 852 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 MFN1Q8IWA4 741 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ULK4Q96C45 1275 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PDLIM2Q96JY6 352 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 MFSD14AQ96MC6 490 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PITPNM3Q9BZ71 974 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SIK2Q9H0K1 926 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PARVBQ9HBI1 364 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PCDHA7Q9UN72 937 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PLAAQ9Y263 795 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PSMD12O00232 456 aaPredicted RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 TTI1O43156 1089 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CPP00450 1065 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CCND1P24385 295 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CASP14P31944 242 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TAP1Q03518 808 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 C1orf146Q5VVC0 180 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 DARS2Q6PI48 645 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 TRIM72Q6ZMU5 477 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CLMNQ96JQ2 1002 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 ALDH8A1Q9H2A2 487 aaPredicted RBP8.16□□□□□ -1.1
USP3-201ENST00000268049 DIABLOQ9NR28 239 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ITGB1BP2Q9UKP3 347 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CHMP2BQ9UQN3 213 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 RGPD5Q99666 1765 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 LRRC37A3O60309 1634 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 GNGT2O14610 69 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 MTA2O94776 668 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ZBED1O96006 694 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 PGK1P00558 417 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SYN1P17600 705 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TAC1P20366 129 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 GRK3P35626 688 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 SLCO1A2P46721 670 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ADCY2Q08462 1091 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CUL4AQ13619 759 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 GPR158Q5T848 1215 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 CXCL17Q6UXB2 119 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 EFCAB3Q8N7B9 438 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 TAAR1Q96RJ0 339 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 ZBTB18Q99592 522 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 MAF1Q9H063 256 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 DOT1LQ8TEK3 1739 aa8.16□□□□□ -1.1
USP3-201ENST00000268049 DUSP11O75319 330 aaKnown RBP8.15□□□□□ -1.1
USP3-201ENST00000268049 CYP2A6P11509 494 aaPredicted RBP8.15□□□□□ -1.1
USP3-201ENST00000268049 GLUD2P49448 558 aa8.15□□□□□ -1.1
USP3-201ENST00000268049 NME3Q13232 169 aa8.15□□□□□ -1.1
USP3-201ENST00000268049 MORC3Q14149 939 aa8.15□□□□□ -1.1
USP3-201ENST00000268049 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms