RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FBXO46Q6PJ61 603 aaPredicted RBP17.29■□□□□ 0.36
TPM1-201ENST00000267996 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 ANKRD52Q8NB46 1076 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 B3GALNT2Q8NCR0 500 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 DBF4BQ8NFT6 615 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 FNIP1Q8TF40 1166 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 ARMC5Q96C12 935 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 MCEEQ96PE7 176 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 LPIN3Q9BQK8 851 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 HESX1Q9UBX0 185 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 INPP5FQ9Y2H2 1132 aa17.29■□□□□ 0.36
TPM1-201ENST00000267996 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 LHX1P48742 406 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 RPL34P49207 117 aaKnown RBP17.28■□□□□ 0.36
TPM1-201ENST00000267996 RWDD2BP57060 319 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 RNASE9P60153 205 aaKnown RBP17.28■□□□□ 0.36
TPM1-201ENST00000267996 OGDHQ02218 1023 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 DSC1Q08554 894 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 TMEM110Q86TL2 294 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
TPM1-201ENST00000267996 SEPT8Q92599 483 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 APBB2Q92870 758 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 PNKPQ96T60 521 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 HNRNPABQ99729 332 aaKnown RBP17.28■□□□□ 0.36
TPM1-201ENST00000267996 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 SYNCQ9H7C4 482 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 TMEM161AQ9NX61 479 aa17.28■□□□□ 0.36
TPM1-201ENST00000267996 PSTPIP1O43586 416 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 CXCL10P02778 98 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 CYP11A1P05108 521 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 KRT3P12035 628 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 CCDC130P13994 396 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 PTPN1P18031 435 aaKnown RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 IBSPP21815 317 aaPredicted RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 RFC1P35251 1148 aaPredicted RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 BCAT1P54687 386 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 PDE4CQ08493 712 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 ZNF211Q13398 564 aaPredicted RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 PIGHQ14442 188 aaPredicted RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 NOMO2Q5JPE7 1267 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 PMF1Q6P1K2 205 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 DSTYKQ6XUX3 929 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 NAP1L3Q99457 506 aaPredicted RBP17.27■□□□□ 0.36
TPM1-201ENST00000267996 CYLDQ9NQC7 956 aa17.27■□□□□ 0.36
TPM1-201ENST00000267996 TET1Q8NFU7 2136 aa17.27■□□□□ 0.35
TPM1-201ENST00000267996 E5RJQ4 531 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 CCDC188H7C350 402 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 M0QZQ0 153 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 TULP2O00295 520 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 GABBR2O75899 941 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 B3GAT3O94766 335 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 PARNO95453 639 aaKnown RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 FGGP02679 453 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 PYGMP11217 842 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 ATN1P54259 1190 aaPredicted RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 TAS2R40P59535 323 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 FAAP100Q0VG06 881 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 BST2Q10589 180 aaKnown RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 WDR93Q6P2C0 686 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 TANC1Q9C0D5 1861 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 DCDC2CA8MYV0 355 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 HSPA8P11142 646 aaKnown RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 TLE2Q04725 743 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 TCTN1Q2MV58 587 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 RHOT1Q8IXI2 618 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 FUKQ8N0W3 1084 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 CRIPAKQ8N1N5 446 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 RUBCNQ92622 972 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 HIPK3Q9H422 1215 aa17.26■□□□□ 0.35
TPM1-201ENST00000267996 DDX43Q9NXZ2 648 aaKnown RBP17.26■□□□□ 0.35
TPM1-201ENST00000267996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
TPM1-201ENST00000267996 F8VP50 259 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 TMEM189-UBE2V1I3L0A0 370 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 KRIT1O00522 736 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 B4GALT3O60512 393 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 ATP2C2O75185 946 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 DDHD2O94830 711 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 ODC1P11926 461 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 RGS7P49802 495 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 SNX16P57768 344 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 BRD3Q15059 726 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 LONRF2Q1L5Z9 754 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 TRIM60Q495X7 471 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 AADACL2Q6P093 401 aa17.25■□□□□ 0.35
TPM1-201ENST00000267996 FAM183BPQ6ZVS7 135 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms