RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 VN1R2Q8NFZ6 395 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 TFAP2BQ92481 460 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 UBXN6Q9BZV1 441 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 GRPEL1Q9HAV7 217 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 DPP7Q9UHL4 492 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 PCDHB5Q9Y5E4 795 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 C2orf16Q68DN1 1984 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 ANAPC1Q9H1A4 1944 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 SEC24AO95486 1093 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 GLP2RO95838 553 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 OR4Q2P0C623 313 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 HAPLN1P10915 354 aaPredicted RBP15.16■□□□□ 0.02
SSBP1-201ENST00000265304 NRIP1P48552 1158 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 TUFMP49411 452 aaKnown RBP15.16■□□□□ 0.02
SSBP1-201ENST00000265304 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 CYP26C1Q6V0L0 522 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
SSBP1-201ENST00000265304 ANKRD52Q8NB46 1076 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 ATAD1Q8NBU5 361 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 KREMEN2Q8NCW0 462 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 ZNF606Q8WXB4 792 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 DDX1Q92499 740 aaKnown RBP15.16■□□□□ 0.02
SSBP1-201ENST00000265304 CYFIP2Q96F07 1278 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 CRISPLD1Q9H336 500 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 IL37Q9NZH6 218 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 PCDHGC3Q9UN70 934 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 NCOR1O75376 2440 aa15.16■□□□□ 0.02
SSBP1-201ENST00000265304 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PER2O15055 1255 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 CYP26A1O43174 497 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 ZMYND10O75800 440 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 HNRNPA1P09651 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 CPB1P15086 417 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 MRE11P49959 708 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PSMC1P62191 440 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PTK2Q05397 1052 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 ADCY1Q08828 1119 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 RAPGEF1Q13905 1077 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 SGO2Q562F6 1265 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PPP1R26Q5T8A7 1209 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 CCDC149Q6ZUS6 474 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 ZNF677Q86XU0 584 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 MYLIPQ8WY64 445 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 MYLPFQ96A32 169 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PABPC5Q96DU9 382 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 SPATA17Q96L03 361 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 C8orf48Q96LL4 319 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PCMTD1Q96MG8 357 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 HEXIM2Q96MH2 286 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 SPAG5Q96R06 1193 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 DNAJC7Q99615 494 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 LPIN3Q9BQK8 851 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 DUSP16Q9BY84 665 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 PNPLA8Q9NP80 782 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 TMEM30AQ9NV96 361 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 DZANK1Q9NVP4 752 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
SSBP1-201ENST00000265304 DOCK8Q8NF50 2099 aa15.15■□□□□ 0.02
SSBP1-201ENST00000265304 ADCY5O95622 1261 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 CYP11B1P15538 503 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 EPCAMP16422 314 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 FERP16591 822 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 HOXB8P17481 243 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-201ENST00000265304 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
SSBP1-201ENST00000265304 LTBRP36941 435 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 DUSP4Q13115 394 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 GSE1Q14687 1217 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 FAM35AQ86V20 835 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 EPS8L1Q8TE68 723 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 STK32AQ8WU08 396 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 CASP10Q92851 521 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 LHX5Q9H2C1 402 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 ZDHHC7Q9NXF8 308 aa15.14■□□□□ 0.01
SSBP1-201ENST00000265304 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.14■□□□□ 0.01
SSBP1-201ENST00000265304 FAM92AA1XBS5 289 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 LRRC53A6NM62 1247 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 OBSL1O75147 1896 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 CCDC172P0C7W6 258 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 PNMA6AP0CW24 399 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 KRT5P13647 590 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 FECHP22830 423 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 CYP2F1P24903 491 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 GNA15P30679 374 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 CASP14P31944 242 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms