RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 R3HDMLQ9H3Y0 253 aa9.59□□□□□ -0.87
MSH4-201ENST00000263187 CYTH4Q9UIA0 394 aa9.59□□□□□ -0.87
MSH4-201ENST00000263187 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
MSH4-201ENST00000263187 USH1CQ9Y6N9 552 aa9.59□□□□□ -0.87
MSH4-201ENST00000263187 COL4A5P29400 1685 aa9.59□□□□□ -0.87
MSH4-201ENST00000263187 B4GALT5O43286 388 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 PLA2G6O60733 806 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 EDF1O60869 148 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 STAM2O75886 525 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 RPL22P35268 128 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 PCK1P35558 622 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 CDKN2BP42772 138 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 RNF43Q68DV7 783 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 RPAINQ86UA6 219 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ARFGAP1Q8N6T3 406 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 MAGEC3Q8TD91 643 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 DENND1AQ8TEH3 1009 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 CPT1BQ92523 772 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SLC13A1Q9BZW2 595 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 TXLNGQ9NUQ3 528 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 GPATCH2LQ9NWQ4 482 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 PIH1D1Q9NWS0 290 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 EURLQ9NYK6 297 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 HMGXB4Q9UGU5 601 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 XPO7Q9UIA9 1087 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 ENO4A6NNW6 628 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ATP2A1O14983 1001 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 KRT3P12035 628 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 BGNP21810 368 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ALDH3A1P30838 453 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SNRPFP62306 86 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 CAPSQ13938 189 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 XKR3Q5GH77 459 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SCYL2Q6P3W7 929 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ZNF677Q86XU0 584 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 PHF13Q86YI8 300 aaPredicted RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 RNF149Q8NC42 400 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 LPAR1Q92633 364 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 TIPINQ9BVW5 301 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 YIPF3Q9GZM5 350 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 DENND2DQ9H6A0 471 aaPredicted RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 PDLIM7Q9NR12 457 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 HEY2Q9UBP5 337 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 RABGEF1Q9UJ41 708 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ZNRF3Q9ULT6 936 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 HEY1Q9Y5J3 304 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 BRCA2P51587 3418 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 ZBTB7AO95365 584 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 TOP3BO95985 862 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 SUPT20HL2P0C7V6 817 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 GEMIN4P57678 1058 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 IGBP1P78318 339 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 NR1H3Q13133 447 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 RIPK1Q13546 671 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 MOGSQ13724 837 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SUPT20HL1Q3ZLR7 823 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SCYL3Q8IZE3 742 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SLC7A6OSQ96CW6 309 aaPredicted RBP9.58□□□□□ -0.88
MSH4-201ENST00000263187 TEPSINQ96N21 525 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 CYP39A1Q9NYL5 469 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 DONSONQ9NYP3 566 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 SYNPO2Q9UMS6 1093 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 CNTNAP2Q9UHC6 1331 aa9.58□□□□□ -0.88
MSH4-201ENST00000263187 A0A0B4J269 797 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 E2F8A0AVK6 867 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 TBC1D12O60347 775 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 OATP04181 439 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 PYGBP11216 843 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 SERPINB3P29508 390 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ELK3P41970 407 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ABL2P42684 1182 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 TGFB2P61812 414 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 BMPR2Q13873 1038 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 OASLQ15646 514 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 PDK4Q16654 411 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 LY6KQ17RY6 165 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ZNF699Q32M78 642 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 DSTYKQ6XUX3 929 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 TMEM35BQ8NCS4 154 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 C10orf82Q8WW14 230 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 CGRRF1Q99675 332 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ARL8BQ9NVJ2 186 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 SLC5A4Q9NY91 659 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 PGAP2Q9UHJ9 254 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 HACL1Q9UJ83 578 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 INO80B-WBP1J3KQ70 363 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ALOX15BO15296 676 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ZC3H11AO75152 810 aaKnown RBP eCLIP9.57□□□□□ -0.88
MSH4-201ENST00000263187 LRCH4O75427 683 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 TCEA3O75764 348 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 CCNB1P14635 433 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 GCKP35557 465 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 C15orf59Q2T9L4 293 aaPredicted RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 DARS2Q6PI48 645 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms