RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 RAB6BQ9NRW1 208 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 ARHGEF12Q9NZN5 1544 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 STAU1O95793 577 aaKnown RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 EIF2S1P05198 315 aaKnown RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 MIIPQ5JXC2 388 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 TNS4Q8IZW8 715 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 PLEKHA8Q96JA3 519 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 SERAC1Q96JX3 654 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 ASCC2Q9H1I8 757 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 GPC2Q8N158 579 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 TASP1Q9H6P5 420 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 SNX8Q9Y5X2 465 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 DHX40Q8IX18 779 aaKnown RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
SHANK3-201ENST00000262795 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
SHANK3-201ENST00000262795 RGS12O14924 1447 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 SH3BGRLO75368 114 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 EPHB4P54760 987 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 NAT16Q8N8M0 369 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 IPCEF1Q8WWN9 437 aaPredicted RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 GMFGO60234 142 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 NFIAQ12857 509 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 ZDHHC6Q9H6R6 413 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 PTPN7P35236 360 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 TARSL2A2RTX5 802 aaKnown RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 HLA-DQA1Q5Y7H0 255 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 GGCXP38435 758 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 PSMC6P62333 389 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 ZSCAN18Q8TBC5 510 aaPredicted RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 DDX43Q9NXZ2 648 aaKnown RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 GPN3Q9UHW5 284 aaPredicted RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
SHANK3-201ENST00000262795 TRIM33Q9UPN9 1127 aa16.5■□□□□ 0.23
SHANK3-201ENST00000262795 NBNO60934 754 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 SRP72O76094 671 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 PGS1Q32NB8 556 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 AGPAT1Q99943 283 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 C2orf81A6NN90 581 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 SETD3Q86TU7 594 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 NUDT5Q9UKK9 219 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 H3BRB1 525 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 LMNAP02545 664 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 NFICP08651 508 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 MYBL1P10243 752 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 SEC13P55735 322 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 ADAM2Q99965 735 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 CHGBP05060 677 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 ICAM1P05362 532 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 POLR2EP19388 210 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 RGMBQ6NW40 437 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 SUSD6Q92537 303 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 STAP2Q9UGK3 403 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 TRDMT1O14717 391 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 ESRRGP62508 458 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 NCAPHQ15003 741 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 BEND6Q5SZJ8 279 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 NRSN1Q8IZ57 195 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 ELAC2Q9BQ52 826 aaKnown RBP16.49■□□□□ 0.23
SHANK3-201ENST00000262795 GULP1Q9UBP9 304 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 CYTH3O43739 400 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 ACADSBP45954 432 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 FAM162AQ96A26 154 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 LNPEPQ9UIQ6 1025 aa16.49■□□□□ 0.23
SHANK3-201ENST00000262795 TRIM66O15016 1216 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 NTSR2O95665 410 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 MSH3P20585 1137 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 GPD1P21695 349 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 PRKAB1Q9Y478 270 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 NT5C1B-RDH14C9J2C7 533 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 HNRNPCP07910 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ERVK-24P63145 666 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 VGLL4Q14135 290 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 NUGGCQ68CJ6 796 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 A0A1W2PQ27 194 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 A0A1W2PQ64 194 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 A0A1W2PQD8 194 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ORC4O43929 436 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 IFNEQ86WN2 208 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 STX19Q8N4C7 294 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 DYRK1BQ9Y463 629 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 RNF103-CHMP3A0A140T963 221 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms