RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ATL2Q8NHH9 583 aa13.37□□□□□ -0.27
TTC39A-202ENST00000262676 RAD21L1Q9H4I0 556 aa13.37□□□□□ -0.27
TTC39A-202ENST00000262676 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
TTC39A-202ENST00000262676 SPASTQ9UBP0 616 aa13.37□□□□□ -0.27
TTC39A-202ENST00000262676 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
TTC39A-202ENST00000262676 CLASP2O75122 1294 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 P4HBP07237 508 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 RALAP11233 206 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 NUMBP49757 651 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 MTM1Q13496 603 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 KLHL17Q6TDP4 642 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 PRUNE1Q86TP1 453 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 REXO4Q9GZR2 422 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 APPL1Q9UKG1 709 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 C17orf102A2RUQ5 167 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 FAM47DPA6NHR8 397 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 EVPLLA8MZ36 301 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 NR3C2P08235 984 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 ZNF23P17027 643 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 LAMB3Q13751 1172 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 C12orf60Q5U649 245 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 KCNV1Q6PIU1 500 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 C9orf72Q96LT7 481 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 C3orf70A6NLC5 250 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 ITGA4P13612 1032 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 OTOAQ7RTW8 1153 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 SLC30A5Q8TAD4 765 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 RAB6BQ9NRW1 208 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 TTC26A0AVF1 554 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 CYP26A1O43174 497 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 IFNAR1P17181 557 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 HNRNPH1P31943 449 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 EIF2B5Q13144 721 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 JADE3Q92613 823 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 ERLEC1Q96DZ1 483 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 AP4S1Q9Y587 144 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 WEE2P0C1S8 567 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 SFNP31947 248 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 DPYDQ12882 1025 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 CDC16Q13042 620 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 SGSM1Q2NKQ1 1148 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 TTC39BQ5VTQ0 682 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 CLEC4MQ9H2X3 399 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 FANCEQ9HB96 536 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 NOD2Q9HC29 1040 aa13.36□□□□□ -0.27
TTC39A-202ENST00000262676 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
TTC39A-202ENST00000262676 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-202ENST00000262676 DHX40Q8IX18 779 aaKnown RBP13.35□□□□□ -0.27
TTC39A-202ENST00000262676 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 CPA5Q8WXQ8 436 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 STAP2Q9UGK3 403 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 IPPQ9Y573 584 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 POU1F1P28069 291 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 MTF1Q14872 753 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 ZSWIM7Q19AV6 140 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 TRIM63Q969Q1 353 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 AGPAT1Q99943 283 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
TTC39A-202ENST00000262676 TRIM39Q9HCM9 518 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 PDP2Q9P2J9 529 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 E9PBE3 544 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 PHF2O75151 1096 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 PSMA4P25789 261 aaKnown RBP13.35□□□□□ -0.27
TTC39A-202ENST00000262676 SERPINB5P36952 375 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 AVPR1AP37288 418 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 NME5P56597 212 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 DGKKQ5KSL6 1271 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 NOL6Q9H6R4 1146 aaKnown RBP13.35□□□□□ -0.27
TTC39A-202ENST00000262676 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 PRKCBP05771 671 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 FDX1P10109 184 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 PSMC3P17980 439 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 HSD17B4P51659 736 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 NFIAQ12857 509 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 CNGA2Q16280 664 aa13.35□□□□□ -0.27
TTC39A-202ENST00000262676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms