RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CYP26A1O43174 497 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 VDRP11473 427 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 ELF1P32519 619 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CLCN1P35523 988 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 ZNF75DP51815 510 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CYP27A1Q02318 531 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 PPP1R26Q5T8A7 1209 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 FUKQ8N0W3 1084 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 BAP1Q92560 729 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CASP10Q92851 521 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 IQCDQ96DY2 449 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CYFIP2Q96F07 1278 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 HNRNPABQ99729 332 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 MAN1C1Q9NR34 630 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 A0A1W2PQJ5 194 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CLDN5O00501 218 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CCDC130P13994 396 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CD19P15391 556 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CYP2F1P24903 491 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 SOX5P35711 763 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CCDC85BQ15834 202 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 ARHGAP17Q68EM7 881 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 CCDC149Q6ZUS6 474 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 RTL10Q7L3V2 364 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 TTC9BQ8N6N2 239 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 SLC2A14Q8TDB8 520 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 TFAP2BQ92481 460 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 PABPC5Q96DU9 382 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 MYO6Q9UM54 1294 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 SLC27A5Q9Y2P5 690 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.429e-7■■□□□ 12.6
CHCHD3-201ENST00000262570 PRUNE2Q8WUY3 3088 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 PRRG1O14668 218 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 C8AP07357 584 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 HAPLN1P10915 354 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 BDNFP23560 247 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 STAT1P42224 750 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 MAGEA11P43364 429 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 TUFMP49411 452 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 PTK2Q05397 1052 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 LIN9Q5TKA1 542 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 ZSWIM1Q9BR11 485 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 RHOBTB2Q9BYZ6 727 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 ZNF518BQ9C0D4 1074 aa17.65■□□□□ 0.42
CHCHD3-201ENST00000262570 PLXNA3P51805 1871 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 O00370 1275 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 ZMYND10O75800 440 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 CALCAP01258 141 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 GYPCP04921 128 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 SRGAP2BP0DMP2 458 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 LTBRP36941 435 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 BPIFB4P59827 614 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 MGAT5BQ3V5L5 792 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 ELMSAN1Q6PJG2 1045 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 VSTM1Q6UX27 236 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 FAM35AQ86V20 835 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 SLC47A2Q86VL8 602 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 ZNF606Q8WXB4 792 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 MED10Q9BTT4 135 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 DZANK1Q9NVP4 752 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 CLEC1BQ9P126 229 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 CAPN11Q9UMQ6 739 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 INSL5Q9Y5Q6 135 aa17.64■□□□□ 0.41
CHCHD3-201ENST00000262570 LRRC53A6NM62 1247 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 RFPL2O75678 378 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 GFPT2O94808 682 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 ADORA2BP29275 332 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 GNA15P30679 374 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 CACNA2D1P54289 1103 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 DLX2Q07687 328 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 CNGA2Q16280 664 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 SMARCD1Q96GM5 515 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 SEPT5Q99719 369 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 GRPEL1Q9HAV7 217 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 TMEM30AQ9NV96 361 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 ZDHHC7Q9NXF8 308 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 TSPAN16Q9UKR8 245 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 YIPF1Q9Y548 306 aa17.63■□□□□ 0.41
CHCHD3-201ENST00000262570 TBX10O75333 385 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 SOAT2O75908 522 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 PAPLNO95428 1278 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ADCY5O95622 1261 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 CYP11B1P15538 503 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 HOXA9P31269 272 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 CASP14P31944 242 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 TRIM14Q14142 442 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 STILQ15468 1287 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 PPM1LQ5SGD2 360 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ANKRD54Q6NXT1 300 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 LCLAT1Q6UWP7 414 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ANKRD52Q8NB46 1076 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 CPLX3Q8WVH0 158 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms