RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FGF19O95750 216 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 MDM2Q00987 491 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 GBP5Q96PP8 586 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 UBXN8O00124 270 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 NDUFB5O43674 189 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 MED21Q13503 144 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 SYT15Q9BQS2 421 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 C20orf96Q9NUD7 363 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 DYRK1BQ9Y463 629 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 GTF2A1P52655 376 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 TAGAPQ8N103 731 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 C1orf54Q8WWF1 131 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 SUSD6Q92537 303 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ADGRE3Q9BY15 652 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 OSGEPL1Q9H4B0 414 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 FOXP2O15409 715 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ALOX15P16050 662 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 HIF1AQ16665 826 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC137Q6PK04 289 aaKnown RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC30A10Q6XR72 485 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ATL2Q8NHH9 583 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ASAH2Q9NR71 780 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 NRCAMQ92823 1304 aa14.15□□□□□ -0.14
PDGFRB-201ENST00000261799 ESRRAP11474 423 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 YWHAQP27348 245 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TEDDM1Q5T9Z0 273 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 CD99L2Q8TCZ2 262 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TMEM51Q9NW97 253 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PAK5Q9P286 719 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 ITGALP20701 1170 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 ARL8AQ96BM9 186 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 SMARCD1Q96GM5 515 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 RNPC3Q96LT9 517 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 CYP3A43Q9HB55 503 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PKD2L2Q9NZM6 624 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 SFMBT1Q9UHJ3 866 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TRAF3IP3Q9Y228 551 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 RPTORQ8N122 1335 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 MEFVO15553 781 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 DNAJC8O75937 253 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 ATP5BP06576 529 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 SLC7A5Q01650 507 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 BST2Q10589 180 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 USP10Q14694 798 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 RD3Q7Z3Z2 195 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 ELOA2Q8IYF1 753 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PSMD12O00232 456 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 NCAM2O15394 837 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 FGBP02675 491 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PMS2P54278 862 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 SEZ6Q53EL9 994 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 FMR1NBQ8N0W7 255 aaPredicted RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 OMDQ99983 421 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 UBE2OQ9C0C9 1292 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 THEGQ9P2T0 379 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 TRMT6Q9UJA5 497 aaKnown RBP14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 MEI4A8MW99 385 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 LGALS2P05162 132 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 KRT20P35900 424 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 PI4K2AQ9BTU6 479 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 FZD1Q9UP38 647 aa14.14□□□□□ -0.15
PDGFRB-201ENST00000261799 MTA2O94776 668 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 KITP10721 976 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 CTSEP14091 401 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 DARSP14868 501 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 FGFR2P21802 821 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 KHDRBS2Q5VWX1 349 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 RETSATQ6NUM9 610 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 CBX4O00257 560 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 FARP2O94887 1054 aaPredicted RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 APOA4P06727 396 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SOAT1P35610 550 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NPTX2P47972 431 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 ANXA11P50995 505 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 CENPCQ03188 943 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 DHX34Q14147 1143 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SHC4Q6S5L8 630 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NIPA1Q7RTP0 329 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms