RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SLC15A5A6NIM6 579 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 KATNA1O75449 491 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 HLA-DRAP01903 254 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MPOP05164 745 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TYK2P29597 1187 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 DSG3P32926 999 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GRIK1P39086 918 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ALDH7A1P49419 539 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SULT1E1P49888 294 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 IFT88Q13099 833 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PRKG1Q13976 671 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 BAATQ14032 418 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC41Q15345 812 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CCNG2Q16589 344 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 RIOX2Q8IUF8 465 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SLC35G2Q8TBE7 412 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 JADE3Q92613 823 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 OTUD5Q96G74 571 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PXMP2Q9NR77 195 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ZC3H7BQ9UGR2 993 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 EFR3BQ9Y2G0 817 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ADGRA3Q8IWK6 1321 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CAND2O75155 1236 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 FTCDO95954 541 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CPB1P15086 417 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ARSEP51690 589 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PKN2Q16513 984 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NAA35Q5VZE5 725 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF544Q6NX49 715 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 OSBPL8Q9BZF1 889 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 AHSPQ9NZD4 102 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SLC25A13Q9UJS0 675 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ADAM28Q9UKQ2 775 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MFHAS1Q9Y4C4 1052 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NRCAMQ92823 1304 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 OCA2Q04671 838 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 C2orf54Q08AI8 447 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 KRT72Q14CN4 511 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 HELQQ8TDG4 1101 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CAVIN3Q969G5 261 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 UBE2E3Q969T4 207 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 AGO4Q9HCK5 861 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 RRP15Q9Y3B9 282 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 H7C0S8 307 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 XYLBO75191 536 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CHGBP05060 677 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MYL2P10916 166 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 EIF4BP23588 611 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GMPSP49915 693 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 POLR2LP62875 67 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 KIF19Q2TAC6 998 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TRIM65Q6PJ69 517 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PI16Q6UXB8 463 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ICA1LQ8NDH6 482 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SNX5Q9Y5X3 404 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NUP188Q5SRE5 1749 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 MYH10P35580 1976 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SDR42E2A6NKP2 422 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ANGPT2O15123 496 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GLRA3O75311 464 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GYS1P13807 737 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 VEGFAP15692 232 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 KCNA4P22459 653 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 BST2Q10589 180 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF507Q8TCN5 953 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PSMB7Q99436 277 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PCDH9Q9HC56 1237 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GBA2Q9HCG7 927 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 RCOR3Q9P2K3 495 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 E9PMD0 336 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 WEE2P0C1S8 567 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PYGMP11217 842 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 JAK1P23458 1154 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TUFMP49411 452 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 WDR72Q3MJ13 1102 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 LPCAT2Q7L5N7 544 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ABRAQ8N0Z2 381 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 BTBD6Q96KE9 485 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SERPINB11Q96P15 392 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TGS1Q96RS0 853 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 BTBD7Q9P203 1132 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SLC30A1Q9Y6M5 507 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CYP2D7A0A087X1C5 515 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PPP3CCP48454 512 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 EPHB3P54753 998 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 RPS6P62753 249 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 CSTF3Q12996 717 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PSMD6Q15008 389 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 NUGGCQ68CJ6 796 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 FKBP9P1Q75LS8 142 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SCN4BQ8IWT1 228 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PARD3BQ8TEW8 1205 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 C18orf25Q96B23 403 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 SMARCD1Q96GM5 515 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 PAWRQ96IZ0 340 aaKnown RBP4.49□□□□□ -1.69
VPS13C-202ENST00000261517 ARHGEF38Q9NXL2 777 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 DPP3Q9NY33 737 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 TXNDC9O14530 226 aa4.49□□□□□ -1.69
VPS13C-202ENST00000261517 GUCY1B2O75343 617 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms