RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IMPDH2P12268 514 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 DNAL1Q4LDG9 190 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
COL8A1-201ENST00000261037 KCTD10Q9H3F6 313 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 A0A1W2PQJ5 194 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 HEATR9A2RTY3 570 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
COL8A1-201ENST00000261037 KDM1AO60341 852 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 ODC1P11926 461 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 RPA1P27694 616 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 RANBP1P43487 201 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 PCYT1AP49585 367 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
COL8A1-201ENST00000261037 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
COL8A1-201ENST00000261037 CYTH3O43739 400 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 EPHB2P29323 1055 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 POU4F1Q01851 419 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CENPCQ03188 943 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CHST13Q8NET6 341 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 E2F7Q96AV8 911 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 WWOXQ9NZC7 414 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 RASSF10A6NK89 507 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 RBP3P10745 1247 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 TRPC1P48995 793 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 TBL3Q12788 808 aaKnown RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 MFSD4BQ5TF39 518 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CAPRIN2Q6IMN6 1127 aaKnown RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 ACAD10Q6JQN1 1059 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CARNMT1Q8N4J0 409 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 KCNB2Q92953 911 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 NUDT12Q9BQG2 462 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 SYTL2Q9HCH5 934 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 NSMCE4AQ9NXX6 385 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 MED24O75448 989 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 SKAP2O75563 359 aaPredicted RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 TRIM16O95361 564 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 TFRCP02786 760 aaKnown RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 RFX3P48380 749 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 RGS4P49798 205 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 GEMIN4P57678 1058 aaKnown RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 AGBL2Q5U5Z8 902 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CALML6Q8TD86 181 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 PLEKHA8Q96JA3 519 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 SPATA31A1Q5TZJ5 1347 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 MRPL28Q13084 256 aaKnown RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 GRB10Q13322 594 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 PHF21AQ96BD5 680 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 H2AFY2Q9P0M6 372 aaPredicted RBP12.58□□□□□ -0.4
COL8A1-201ENST00000261037 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
COL8A1-201ENST00000261037 SEC24CP53992 1094 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC157Q569K6 752 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 RIT2Q99578 217 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 AP1G2O75843 785 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 KCNA3P22001 575 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CAPZA2P47755 286 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SERPINB4P48594 390 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CLCN3P51790 818 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 GALNTL6Q49A17 601 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 EPS8L3Q8TE67 593 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CASKIN2Q8WXE0 1202 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ELMO3Q96BJ8 720 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CNBD2Q96M20 576 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SPATA16Q9BXB7 569 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SPASTQ9UBP0 616 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TRIM49D1C9J1S8 452 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 HPCAP84074 193 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PTK6Q13882 451 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TRIP10Q15642 601 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TMEM154Q6P9G4 183 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ATP11BQ9Y2G3 1177 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 IQGAP1P46940 1657 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 FOXP2O15409 715 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SERPINB5P36952 375 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms