RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 RAP1GAPP47736 663 aa18.35■□□□□ 0.53
NDFIP1-201ENST00000253814 MAMLD1Q13495 774 aa18.35■□□□□ 0.53
NDFIP1-201ENST00000253814 PSPC1Q8WXF1 523 aaKnown RBP18.35■□□□□ 0.53
NDFIP1-201ENST00000253814 PIH1D1Q9NWS0 290 aaKnown RBP18.35■□□□□ 0.53
NDFIP1-201ENST00000253814 SDC4P31431 198 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 ACTR2P61160 394 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 GCNT1Q02742 428 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 FAAP100Q0VG06 881 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 STXBP2Q15833 593 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 MMEL1Q495T6 779 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 C4orf19Q8IY42 314 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 POU5F2Q8N7G0 328 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 GJD4Q96KN9 370 aaPredicted RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 AGAP3Q96P47 875 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 WRNIP1Q96S55 665 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 HNRNPCL1O60812 293 aaKnown RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 DAW1Q8N136 415 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 TMEM161BQ8NDZ6 487 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 CISHQ9NSE2 258 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 STARD13Q9Y3M8 1113 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 NUP98P52948 1817 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 LGR5O75473 907 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 MUTP22033 750 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 ARL4AP40617 200 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 GARSP41250 739 aaKnown RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 RANBP1P43487 201 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 RIPK1Q13546 671 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 IZUMO2Q6UXV1 221 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 GADL1Q6ZQY3 521 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 DMAC2Q9NW81 257 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 SLC24A2Q9UI40 661 aa18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 NOCTQ9UK39 431 aaKnown RBP18.34■□□□□ 0.53
NDFIP1-201ENST00000253814 KBTBD13C9JR72 458 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 GTF2BQ00403 316 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 SLC15A2Q16348 729 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 PDK4Q16654 411 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 WLSQ5T9L3 541 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 OR6B3Q8NGW1 331 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 LRGUKQ96M69 825 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 TRIM56Q9BRZ2 755 aaKnown RBP18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 BTBD10Q9BSF8 475 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 SLC17A7Q9P2U7 560 aa18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 TRPC5Q9UL62 973 aaPredicted RBP18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 ZNF142P52746 1687 aaPredicted RBP18.33■□□□□ 0.53
NDFIP1-201ENST00000253814 FAM237BA0A1B0GVD1 139 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 MEI4A8MW99 385 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 EDIL3O43854 480 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 CSDE1O75534 798 aaKnown RBP18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 SLC12A2P55011 1212 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 WDR4P57081 412 aaKnown RBP18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 MPP2Q14168 576 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 CEP70Q8NHQ1 597 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 LRP6O75581 1613 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 LIASO43766 372 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 CAP2P40123 477 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 CACNA2D1P54289 1103 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 IFRD2Q12894 506 aaPredicted RBP18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 HEATR6Q6AI08 1181 aaKnown RBP18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 Q9H521 79 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 AVENQ9NQS1 362 aaPredicted RBP18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 TAF1P21675 1872 aa18.33■□□□□ 0.52
NDFIP1-201ENST00000253814 EDF1O60869 148 aaKnown RBP18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 SNX16P57768 344 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 MED21Q13503 144 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 KBTBD12Q3ZCT8 623 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 FAM228AQ86W67 206 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 HELQQ8TDG4 1101 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 IDI2Q9BXS1 227 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 PCDH9Q9HC56 1237 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 CHKBQ9Y259 395 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 PAPOLAP51003 745 aaKnown RBP18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 SNRPFP62306 86 aaKnown RBP18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 DACT2Q5SW24 774 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 DCAF15Q66K64 600 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 SHOC2Q9UQ13 582 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 PRKCBP05771 671 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 ATP4AP20648 1035 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 GARTP22102 1010 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 CDH8P55286 799 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 POU5F1Q01860 360 aaKnown RBP18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 ART3Q13508 389 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 RFWD2Q8NHY2 731 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 MAGEC3Q8TD91 643 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 CLMNQ96JQ2 1002 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
NDFIP1-201ENST00000253814 WDR46O15213 610 aaKnown RBP18.31■□□□□ 0.52
NDFIP1-201ENST00000253814 CREB3O43889 395 aa18.31■□□□□ 0.52
NDFIP1-201ENST00000253814 STAT5BP51692 787 aa18.31■□□□□ 0.52
NDFIP1-201ENST00000253814 SGSM1Q2NKQ1 1148 aa18.31■□□□□ 0.52
NDFIP1-201ENST00000253814 LRRC74BQ6ZQY2 392 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms