RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 FAXCQ5TGI0 409 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 BSPRYQ5W0U4 402 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 DENND1BQ6P3S1 775 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 PPM1NQ8N819 430 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 HAPLN2Q9GZV7 340 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.36■□□□□ 0.69
LRP3-201ENST00000253193 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 MED7O43513 233 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 ADCY3O60266 1144 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 NRLP54845 237 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 IRX4P78413 519 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 PPP6R3Q5H9R7 873 aaPredicted RBP19.36■□□□□ 0.69
LRP3-201ENST00000253193 LONP2Q86WA8 852 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 PAFAH2Q99487 392 aa19.36■□□□□ 0.69
LRP3-201ENST00000253193 SPATA31C2B4DYI2 1134 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 LPXNO60711 386 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 MXRA7P84157 204 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 PCGF5Q86SE9 256 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 SENP1Q9P0U3 644 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 TJP2Q9UDY2 1190 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 hCG_1818297A0A087WSY0 165 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 DESP17661 470 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 RTP1P59025 263 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 TGFB2P61812 414 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 OGDHQ02218 1023 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 MCL1Q07820 350 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 PPIL6Q8IXY8 311 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 TFAP2BQ92481 460 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 ZBTB10Q96DT7 871 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 TP73O15350 636 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 CASC4Q6P4E1 433 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 MTDHQ86UE4 582 aaKnown RBP19.35■□□□□ 0.69
LRP3-201ENST00000253193 CCDC33Q8N5R6 958 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 JOSD2Q8TAC2 188 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 LRRN4Q8WUT4 740 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 SEPT1Q8WYJ6 367 aa19.35■□□□□ 0.69
LRP3-201ENST00000253193 ZNF214Q9UL59 606 aaPredicted RBP19.35■□□□□ 0.69
LRP3-201ENST00000253193 OGTO15294 1046 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 CCND1P24385 295 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 PEX19P40855 299 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 EFNA5P52803 228 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 MGAT5Q09328 741 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 ZNF772Q68DY9 489 aaPredicted RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 NAIF1Q69YI7 327 aaPredicted RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 MAML1Q92585 1016 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 L3MBTL3Q96JM7 780 aaPredicted RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 NUDCD1Q96RS6 583 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 SLC13A1Q9BZW2 595 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 EBF2Q9HAK2 575 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 KLRC2P26717 231 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 RGS7P49802 495 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 CRYMQ14894 314 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 TAF1BQ53T94 588 aaPredicted RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 RFX8Q6ZV50 586 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 BRSK2Q8IWQ3 736 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 TCP10LQ8TDR4 215 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 PCDH9Q9HC56 1237 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 PRPSAP2O60256 369 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 ASS1P00966 412 aaKnown RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 UBA1P22314 1058 aaKnown RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 ZNF268Q14587 947 aaPredicted RBP19.34■□□□□ 0.69
LRP3-201ENST00000253193 KLHL38Q2WGJ6 581 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 ANKRD22Q5VYY1 191 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 TRIM55Q9BYV6 548 aa19.34■□□□□ 0.69
LRP3-201ENST00000253193 CD48P09326 243 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 CXCL8P10145 99 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 PTP4A2Q12974 167 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 CGB2Q6NT52 195 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 CCDC62Q6P9F0 684 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 C15orf39Q6ZRI6 1047 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 WDR49Q8IV35 697 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 RAB6BQ9NRW1 208 aa19.33■□□□□ 0.69
LRP3-201ENST00000253193 NDC80O14777 642 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 UNC5CO95185 931 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 CLCN3P51790 818 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 RAD23BP54727 409 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 GDF10P55107 478 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 TAP1Q03518 808 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 LAMTOR4Q0VGL1 99 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 NLRP9Q7RTR0 991 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 CCDC125Q86Z20 511 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 ZNF75CPQ92670 426 aaPredicted RBP19.33■□□□□ 0.68
LRP3-201ENST00000253193 LGALS13Q9UHV8 139 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 KITP10721 976 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 ATP4AP20648 1035 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 ATF7IP2Q5U623 682 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 BZW1Q7L1Q6 419 aaKnown RBP19.33■□□□□ 0.68
LRP3-201ENST00000253193 SPDL1Q96EA4 605 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 TEPSINQ96N21 525 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 FAM111AQ96PZ2 611 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 TRIM6Q9C030 488 aaPredicted RBP19.33■□□□□ 0.68
LRP3-201ENST00000253193 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.33■□□□□ 0.68
LRP3-201ENST00000253193 SHOC2Q9UQ13 582 aa19.33■□□□□ 0.68
LRP3-201ENST00000253193 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
LRP3-201ENST00000253193 CCDC189A1A4V9 331 aa19.32■□□□□ 0.68
LRP3-201ENST00000253193 PGK2P07205 417 aa19.32■□□□□ 0.68
LRP3-201ENST00000253193 RFC5P40937 340 aa19.32■□□□□ 0.68
LRP3-201ENST00000253193 AP3M2P53677 418 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms