RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 DDX27Q96GQ7 796 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 ATXN7L3BQ96GX2 97 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 CATSPERBQ9H7T0 1116 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 DMGDHQ9UI17 866 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 PHRF1Q9P1Y6 1649 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 FARP2O94887 1054 aaPredicted RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 ANO4Q32M45 955 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 LMNTD2Q8IXW0 634 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TTC8Q8TAM2 541 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 VCX3BQ9H321 246 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TXNDC9O14530 226 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 RECQL4O94761 1208 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 HOXC6P09630 235 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 ALDH1A3P47895 512 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 RBBP5Q15291 538 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 COBLL1Q53SF7 1204 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 MDH1BQ5I0G3 518 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 ABHD15Q6UXT9 468 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 LBHD1Q9BQE6 289 aaPredicted RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 KRT82Q9NSB4 513 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 GPATCH2LQ9NWQ4 482 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 SENP1Q9P0U3 644 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 CCDC78A2IDD5 438 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 KPNA7A9QM74 516 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 F8W8V4 182 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 PGK1P00558 417 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 PHLDB3Q6NSJ2 640 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 C11orf63Q6NUN7 778 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 FAM131BQ86XD5 332 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 NT5DC4Q86YG4 428 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TRABDQ9H4I3 376 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TNFSF13BQ9Y275 285 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 GOLGA8RI6L899 631 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 NEMP1O14524 444 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 HOXA2O43364 376 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 AGTP01019 485 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 STIP1P31948 543 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 MAP3K7CLP57077 242 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 BST2Q10589 180 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 MROH7Q68CQ1 1323 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 CYBBP04839 570 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 ACAT1P24752 427 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 RTP1P59025 263 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 LRIG3Q6UXM1 1119 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 CLEC4DQ8WXI8 215 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 HMX1Q9NP08 348 aaPredicted RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 GUCY1A3Q02108 690 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 SLC12A1Q13621 1099 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 CCNYL1Q8N7R7 359 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 CASKIN2Q8WXE0 1202 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 ZIM3Q96PE6 472 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 SYT15Q9BQS2 421 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 TXLNGQ9NUQ3 528 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 DSEQ9UL01 958 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 TRPV2Q9Y5S1 764 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 IGLV3-22A0A075B6J6 115 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 RAB27AP51159 221 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 NAA25Q14CX7 972 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 CTXN3Q4LDR2 81 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 TDRD10Q5VZ19 366 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 IL31Q6EBC2 164 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 EXD1Q8NHP7 514 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 TLR10Q9BXR5 811 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 FGFBP2Q9BYJ0 223 aa17.8■□□□□ 0.44
ACTN4-201ENST00000252699 SARS2Q9NP81 518 aaKnown RBP17.8■□□□□ 0.44
ACTN4-201ENST00000252699 F9P00740 461 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 PRKCIP41743 596 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 IRF2BP1Q8IU81 584 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
ACTN4-201ENST00000252699 ACP6Q9NPH0 428 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 PPARGC1AQ9UBK2 798 aaKnown RBP17.79■□□□□ 0.44
ACTN4-201ENST00000252699 USP18Q9UMW8 372 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 FZD9O00144 591 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 ESRRAP11474 423 aaPredicted RBP17.79■□□□□ 0.44
ACTN4-201ENST00000252699 DRP2Q13474 957 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 PTGISQ16647 500 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 C3orf62Q6ZUJ4 267 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 MIB1Q86YT6 1006 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 NUDCD3Q8IVD9 361 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 EPS8L1Q8TE68 723 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 CDT1Q9H211 546 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 IKZF4Q9H2S9 585 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 ABCF3Q9NUQ8 709 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 UBA6A0AVT1 1052 aaPredicted RBP17.79■□□□□ 0.44
ACTN4-201ENST00000252699 SMAPO00193 183 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 EGFRP00533 1210 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 GJB1P08034 283 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 SETSIPP0DME0 302 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 NCKAP1LP55160 1127 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 MCL1Q07820 350 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 VCPIP1Q96JH7 1222 aa17.79■□□□□ 0.44
ACTN4-201ENST00000252699 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms