RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 EXOC1LA0A1B0GW35 172 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 FAM47DPA6NHR8 397 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 MAFO75444 373 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 EDNRBP24530 442 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 RXRBP28702 533 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PTPN7P35236 360 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 COPS2P61201 443 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 DYNLT1P63172 113 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 HSDL1Q3SXM5 330 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 TFDP3Q5H9I0 405 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ARMC3Q5W041 872 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 TRNP1Q6NT89 227 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CYP4V2Q6ZWL3 525 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 WDR49Q8IV35 697 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 NIPA2Q8N8Q9 360 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 TRAPPC12Q8WVT3 735 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CPT1BQ92523 772 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CPXM1Q96SM3 734 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 RXFP1Q9HBX9 757 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PTPRHQ9HD43 1115 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 SIX4Q9UIU6 781 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ARL2BPQ9Y2Y0 163 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 LRRD1A4D1F6 860 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 SOCS7O14512 581 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CCNB1P14635 433 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PROZP22891 400 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 MARK3P27448 753 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 SSTR1P30872 391 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 CDH8P55286 799 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 ZBTB16Q05516 673 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PRKG1Q13976 671 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 STXBP2Q15833 593 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 CAPRIN2Q6IMN6 1127 aaKnown RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 IGDCC3Q8IVU1 814 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 JDP2Q8WYK2 163 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 PIWIL1Q96J94 861 aaKnown RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
COPB1-201ENST00000249923 PIM2Q9P1W9 311 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 GJA3Q9Y6H8 435 aa10.64□□□□□ -0.71
COPB1-201ENST00000249923 H0YCG3 227 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ALOX15BO15296 676 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 MAGEB2O15479 319 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 DKC1O60832 514 aaKnown RBP eCLIP10.63□□□□□ -0.71
COPB1-201ENST00000249923 STAM2O75886 525 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ITGAVP06756 1048 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 OSTNP61366 133 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 MXRA7P84157 204 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 LRRC38Q5VT99 294 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 DNAJC24Q6P3W2 148 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TDRPQ86YL5 185 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ACTL9Q8TC94 416 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 NIF3L1Q9GZT8 377 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 MYLK2Q9H1R3 596 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 RABGEF1Q9UJ41 708 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 PRPF4O43172 522 aaKnown RBP eCLIP10.63□□□□□ -0.716e-8■■■■■ 28.1
COPB1-201ENST00000249923 SUN1O94901 812 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ERBB2P04626 1255 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 SRGAP2CP0DJJ0 459 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 T-ENOLP0DO92 83 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
COPB1-201ENST00000249923 LAMTOR4Q0VGL1 99 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TFDP1Q14186 410 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TAZQ16635 292 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 NAT8LQ8N9F0 302 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 RBM41Q96IZ5 413 aaKnown RBP10.63□□□□□ -0.71
COPB1-201ENST00000249923 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 IMPG2Q9BZV3 1241 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 CYLDQ9NQC7 956 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 PICK1Q9NRD5 415 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 EVPLQ92817 2033 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TOM1L1O75674 476 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TJP3O95049 919 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 LDHAP00338 332 aaKnown RBP10.63□□□□□ -0.71
COPB1-201ENST00000249923 KRT15P19012 456 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 MCL1Q07820 350 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 RNF43Q68DV7 783 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 UNC45BQ8IWX7 931 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 TMEM237Q96Q45 408 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 DHRS4Q9BTZ2 278 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ASCC2Q9H1I8 757 aaPredicted RBP10.63□□□□□ -0.71
COPB1-201ENST00000249923 TRABDQ9H4I3 376 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 ZWILCHQ9H900 591 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 NKIRAS1Q9NYS0 192 aa10.63□□□□□ -0.71
COPB1-201ENST00000249923 DRG1Q9Y295 367 aaKnown RBP10.63□□□□□ -0.71
COPB1-201ENST00000249923 FZD9O00144 591 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 CSDE1O75534 798 aaKnown RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 IFNB1P01574 187 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 GM2AP17900 193 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 ATP5DP30049 168 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 PDIA2Q13087 525 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms