RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 GPR162Q16538 588 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 KYAT1Q16773 422 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 PLEKHH3Q7Z736 793 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 C10orf67Q8IYJ2 551 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 SELENOSQ9BQE4 189 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 ITGA11Q9UKX5 1188 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 BARX2Q9UMQ3 279 aaPredicted RBP22.83■■□□□ 1.25
CLN6-201ENST00000249806 FAM169AQ9Y6X4 670 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 DNAH12Q6ZR08 3092 aa22.83■■□□□ 1.25
CLN6-201ENST00000249806 SCN1AP35498 2009 aa22.83■■□□□ 1.24
CLN6-201ENST00000249806 NPTXRO95502 500 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 HOXD8P13378 290 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 HOXA11P31270 313 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 MMP13P45452 471 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 DYNLT1P63172 113 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 LMNB2Q03252 620 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 ZNF268Q14587 947 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 TNFAIP8L3Q5GJ75 292 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 C12orf29Q8N999 325 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 TSPYL1Q9H0U9 437 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 CNOT10Q9H9A5 744 aaKnown RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 RNF19AQ9NV58 838 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 PCSK1NQ9UHG2 260 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 DYNC1LI2O43237 492 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 VDRP11473 427 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 CHN1P15882 459 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 CYP3A5P20815 502 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 PLCB3Q01970 1234 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 PDE4CQ08493 712 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 HIBCHQ6NVY1 386 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 DRICH1Q6PGQ1 229 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 POLNQ7Z5Q5 900 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 CROCCP2Q86T23 111 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 ALLCQ8N6M5 410 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 TMEM121Q9BTD3 319 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 ROPN1BQ9BZX4 212 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 ROPN1Q9HAT0 212 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 GBA2Q9HCG7 927 aaPredicted RBP22.82■■□□□ 1.24
CLN6-201ENST00000249806 SNTG2Q9NY99 539 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 NINJ2Q9NZG7 142 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 HES2Q9Y543 173 aa22.82■■□□□ 1.24
CLN6-201ENST00000249806 SRRM3A6NNA2 597 aaPredicted RBP22.81■■□□□ 1.24
CLN6-201ENST00000249806 CD48P09326 243 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 PTPN7P35236 360 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 ARSEP51690 589 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 TAF5Q15542 800 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 IQSEC1Q6DN90 963 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 ZNF410Q86VK4 478 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 BBOF1Q8ND07 529 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 FNIP1Q8TF40 1166 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 C9orf72Q96LT7 481 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 ZMAT2Q96NC0 199 aaKnown RBP22.81■■□□□ 1.24
CLN6-201ENST00000249806 ADAMTS10Q9H324 1103 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 WDR35Q9P2L0 1181 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 HMGCRP04035 888 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 GRM5P41594 1212 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 GABRB2P47870 512 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 CORO7P57737 925 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 INCA1Q0VD86 236 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 OASLQ15646 514 aaKnown RBP22.81■■□□□ 1.24
CLN6-201ENST00000249806 SMYD5Q6GMV2 418 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 EIF2AQ9BY44 585 aaKnown RBP22.81■■□□□ 1.24
CLN6-201ENST00000249806 C10orf88Q9H8K7 445 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 CTNNAL1Q9UBT7 734 aa22.81■■□□□ 1.24
CLN6-201ENST00000249806 PPEF2O14830 753 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 QPCTQ16769 361 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 FAM110CQ1W6H9 321 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 SPRYD7Q5W111 196 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 MFSD5Q6N075 450 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 IPO4Q8TEX9 1081 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 MCRS1Q96EZ8 462 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 PARK7Q99497 189 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 DRG1Q9Y295 367 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 FOXO6A8MYZ6 492 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 KRT7P08729 469 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 KDELR1P24390 212 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 VCPP55072 806 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 GSCP56915 257 aaPredicted RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 GPS1Q13098 491 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 HADHQ16836 314 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 ERMARDQ5T6L9 678 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 FAM102AQ5T9C2 384 aaPredicted RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 SH3PXD2AQ5TCZ1 1133 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 B4GALNT4Q76KP1 1039 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 EXOC3L1Q86VI1 746 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 PIWIL1Q96J94 861 aaKnown RBP22.8■■□□□ 1.24
CLN6-201ENST00000249806 RBM15Q96T37 977 aaKnown RBP eCLIP22.8■■□□□ 1.242e-7■■■■□ 25.8
CLN6-201ENST00000249806 TSPAN16Q9UKR8 245 aa22.8■■□□□ 1.24
CLN6-201ENST00000249806 CST8O60676 142 aa22.79■■□□□ 1.24
CLN6-201ENST00000249806 GPR32O75388 356 aa22.79■■□□□ 1.24
CLN6-201ENST00000249806 MIPP30301 263 aa22.79■■□□□ 1.24
CLN6-201ENST00000249806 XPO6Q96QU8 1125 aaKnown RBP22.79■■□□□ 1.24
CLN6-201ENST00000249806 OSMRQ99650 979 aa22.79■■□□□ 1.24
CLN6-201ENST00000249806 NT5C1AQ9BXI3 368 aa22.79■■□□□ 1.24
CLN6-201ENST00000249806 SGK1O00141 431 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 DNALI1O14645 258 aaPredicted RBP22.78■■□□□ 1.24
CLN6-201ENST00000249806 IFNB1P01574 187 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 CDR1P51861 262 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms