RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FEZ2Q9UHY8 353 aaPredicted RBP19.49■□□□□ 0.71
HOXC11-201ENST00000243082 NEU2Q9Y3R4 380 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 PIRO00625 290 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 CYBAP13498 195 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 IVDP26440 423 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 GJA9P57773 515 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 COPS2P61201 443 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 SLC25A11Q02978 314 aaKnown RBP19.49■□□□□ 0.71
HOXC11-201ENST00000243082 SPOCD1Q6ZMY3 1216 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 POLNQ7Z5Q5 900 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 SH2D3CQ8N5H7 860 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 ACSF2Q96CM8 615 aaPredicted RBP19.49■□□□□ 0.71
HOXC11-201ENST00000243082 KCNE1P15382 129 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 PTPN7P35236 360 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 CENPFP49454 3210 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 SOWAHAQ2M3V2 549 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 PKDCCQ504Y2 493 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 GNASQ5JWF2 1037 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 ZFYVE27Q5T4F4 411 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 PPP1R26Q5T8A7 1209 aaPredicted RBP19.48■□□□□ 0.71
HOXC11-201ENST00000243082 KAZNQ674X7 775 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 ACOT1Q86TX2 421 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 SMG8Q8ND04 991 aaKnown RBP19.48■□□□□ 0.71
HOXC11-201ENST00000243082 TRIB2Q92519 343 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 FAM129AQ9BZQ8 928 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 WHRNQ9P202 907 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 MTRF1LQ9UGC7 380 aaKnown RBP19.48■□□□□ 0.71
HOXC11-201ENST00000243082 GABRQQ9UN88 632 aa19.48■□□□□ 0.71
HOXC11-201ENST00000243082 C3orf70A6NLC5 250 aaPredicted RBP19.47■□□□□ 0.71
HOXC11-201ENST00000243082 KPNA6O60684 536 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 IL1R2P27930 398 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 CDKN2BP42772 138 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 PMS2P54278 862 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 STILQ15468 1287 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 GOLGA7BQ2TAP0 167 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 TAF2Q6P1X5 1199 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 ATP6V1G3Q96LB4 118 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 IPPQ9Y573 584 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 hCG_1818297A0A087WSY0 165 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 TJP3O95049 919 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 GAS8O95995 478 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 CD4P01730 458 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 ATF7P17544 494 aaPredicted RBP19.47■□□□□ 0.71
HOXC11-201ENST00000243082 CAPN2P17655 700 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 PSMC4P43686 418 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 TFDP3Q5H9I0 405 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 FAM228AQ86W67 206 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 ARRDC4Q8NCT1 418 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 CCDC114Q96M63 670 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 MTG1Q9BT17 334 aaPredicted RBP19.47■□□□□ 0.71
HOXC11-201ENST00000243082 PABPC3Q9H361 631 aaKnown RBP19.47■□□□□ 0.71
HOXC11-201ENST00000243082 ASIC3Q9UHC3 531 aa19.47■□□□□ 0.71
HOXC11-201ENST00000243082 PDCD11Q14690 1871 aaKnown RBP19.47■□□□□ 0.71
HOXC11-201ENST00000243082 LRRD1A4D1F6 860 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 E5RJQ4 531 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 SPTLC1O15269 473 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 ITIH2P19823 946 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 SOX4Q06945 474 aaPredicted RBP19.46■□□□□ 0.71
HOXC11-201ENST00000243082 CALCOCO2Q13137 446 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 TRIP13Q15645 432 aaPredicted RBP19.46■□□□□ 0.71
HOXC11-201ENST00000243082 FBXO47Q5MNV8 452 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 FAM102AQ5T9C2 384 aaPredicted RBP19.46■□□□□ 0.71
HOXC11-201ENST00000243082 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 UNC93AQ86WB7 457 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 TTC30AQ86WT1 665 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 IPO4Q8TEX9 1081 aaKnown RBP19.46■□□□□ 0.71
HOXC11-201ENST00000243082 TSPAN18Q96SJ8 248 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 GTF2IRD1Q9UHL9 959 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 ERICH4A6NGS2 130 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 TULP2O00295 520 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 LIASO43766 372 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 PGK1P00558 417 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 MYZAPP0CAP1 466 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 FCGRTP55899 365 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 NBPF20Q3BBV1 942 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 MFSD14CQ5VZR4 134 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 CXCL17Q6UXB2 119 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 OR6B3Q8NGW1 331 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 SNF8Q96H20 258 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 LRRC4CQ9HCJ2 640 aa19.46■□□□□ 0.71
HOXC11-201ENST00000243082 DNAH12Q6ZR08 3092 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 GOLGA6L10A6NI86 522 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 HMGB1P1B2RPK0 211 aaPredicted RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 PIK3R2O00459 728 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 KRT7P08729 469 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 NUDT17P0C025 328 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 ACAP1Q15027 740 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 HADHQ16836 314 aaKnown RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 SMTNL2Q2TAL5 461 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 TRNP1Q6NT89 227 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 PMF1Q6P1K2 205 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 DRICH1Q6PGQ1 229 aaPredicted RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 FAM183BPQ6ZVS7 135 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 KBTBD7Q8WVZ9 684 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 PIWIL1Q96J94 861 aaKnown RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 LPIN3Q9BQK8 851 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 UPF3AQ9H1J1 476 aaKnown RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 SEMA4AQ9H3S1 761 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms