RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GPD2P43304 727 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 MAGEA4P43358 317 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 IFT88Q13099 833 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 GJC2Q5T442 439 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 CACNA2D3Q8IZS8 1091 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 RIBC1Q8N443 379 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 GLIS1Q8NBF1 620 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 SLC10A4Q96EP9 437 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 RBM15Q96T37 977 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 CCDC77Q9BR77 488 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 TJP2Q9UDY2 1190 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 AKT3Q9Y243 479 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 ACTL7BQ9Y614 415 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 MICAL2O94851 1124 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
UBE3D-201ENST00000237186 ERBB2P04626 1255 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 ARSEP51690 589 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 PPARDQ03181 441 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 BBS12Q6ZW61 710 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
UBE3D-201ENST00000237186 P3H4Q92791 437 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 HPDLQ96IR7 371 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 PWWP2AQ96N64 755 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 TTC25Q96NG3 672 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
UBE3D-201ENST00000237186 MORF4L1Q9UBU8 362 aa17.02■□□□□ 0.32
UBE3D-201ENST00000237186 GOLGA8SH3BPF8 625 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 H3BRB1 525 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 TSPAN1O60635 241 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 KDELR1P24390 212 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 RBP5P82980 135 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 TMEM132DQ14C87 1099 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 PRUNE1Q86TP1 453 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 ZNF410Q86VK4 478 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 CPB2Q96IY4 423 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 CFAP57Q96MR6 1250 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 TUT1Q9H6E5 874 aaKnown RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 DNAJC17Q9NVM6 304 aaKnown RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 ALOX15BO15296 676 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 VTNP04004 478 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 PCK1P35558 622 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 LIG3P49916 1009 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 GPS1Q13098 491 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 RNASEH2BQ5TBB1 312 aaKnown RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 TDRPQ86YL5 185 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 PRMT1Q99873 361 aaKnown RBP17.01■□□□□ 0.31
UBE3D-201ENST00000237186 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 SHOC2Q9UQ13 582 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 NAALADL1Q9UQQ1 740 aa17.01■□□□□ 0.31
UBE3D-201ENST00000237186 ZSCAN5DPP0CG00 497 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 ADCYAP1R1P41586 468 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 GRM5P41594 1212 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 GCLCP48506 637 aaPredicted RBP17■□□□□ 0.31
UBE3D-201ENST00000237186 MYO1EQ12965 1108 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 MARCH8Q5T0T0 291 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 LCLAT1Q6UWP7 414 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 PCGF5Q86SE9 256 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 ACSF2Q96CM8 615 aaPredicted RBP17■□□□□ 0.31
UBE3D-201ENST00000237186 MS4A4AQ96JQ5 239 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 MIS12Q9H081 205 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 SYNCQ9H7C4 482 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
UBE3D-201ENST00000237186 DPP3Q9NY33 737 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
UBE3D-201ENST00000237186 TMEM120BA0PK00 339 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 PDHXO00330 501 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ENDOD1O94919 500 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 CETPP11597 493 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 PECAM1P16284 738 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ITIH4Q14624 930 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 RASA2Q15283 850 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 STILQ15468 1287 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 CCDC38Q502W7 563 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 CCDC121Q6ZUS5 278 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 C9orf72Q96LT7 481 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ADPGKQ9BRR6 497 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 DERAQ9Y315 318 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 TRUB2O95900 331 aaKnown RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ZNF286BP0CG31 522 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ETS1P14921 441 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ZNF143P52747 638 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 CDC42EP1Q00587 391 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 OTUD4Q01804 1114 aaKnown RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 GRIK4Q16099 956 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 DUSP28Q4G0W2 176 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 LACTB2Q53H82 288 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms