RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TRABD2AQ86V40 505 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 HELQQ8TDG4 1101 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 TMC2Q8TDI7 906 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 DDX27Q96GQ7 796 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 PAWRQ96IZ0 340 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 PITPNM3Q9BZ71 974 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 HSPBP1Q9NZL4 362 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 PHF24Q9UPV7 400 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 WDR81Q562E7 1941 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 A0A1W2PQ45 241 aaPredicted RBP21.65■■□□□ 1.06
SNX3-201ENST00000230085 A0A1W2PQY0 241 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 K7ENM7 598 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 KPNA6O60684 536 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 PSAPP07602 524 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 PLS3P13797 630 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 GCLMP48507 274 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 WDR4P57081 412 aaKnown RBP21.65■■□□□ 1.06
SNX3-201ENST00000230085 CYP4X1Q8N118 509 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 PLEKHO2Q8TD55 490 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 MGARPQ8TDB4 240 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 PRCCQ92733 491 aaPredicted RBP21.65■■□□□ 1.06
SNX3-201ENST00000230085 NAF1Q96HR8 494 aaKnown RBP21.65■■□□□ 1.06
SNX3-201ENST00000230085 LXNQ9BS40 222 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 SENP6Q9GZR1 1112 aaPredicted RBP21.65■■□□□ 1.06
SNX3-201ENST00000230085 ETNK1Q9HBU6 452 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 SAR1AQ9NR31 198 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 CHST7Q9NS84 486 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 LNPEPQ9UIQ6 1025 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 MROH7Q68CQ1 1323 aa21.65■■□□□ 1.06
SNX3-201ENST00000230085 H3BRB1 525 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 CYP26A1O43174 497 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 LGR5O75473 907 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 LMNAP02545 664 aaKnown RBP21.64■■□□□ 1.06
SNX3-201ENST00000230085 UNGP13051 313 aaPredicted RBP21.64■■□□□ 1.06
SNX3-201ENST00000230085 ALDH3A1P30838 453 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 STAT5BP51692 787 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 PDK4Q16654 411 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 KRT39Q6A163 491 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 PADI6Q6TGC4 694 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 SLC47A2Q86VL8 602 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 KIF2BQ8N4N8 673 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 ANKRD42Q8N9B4 389 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 RDM1Q8NG50 284 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 STK32AQ8WU08 396 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 C1orf54Q8WWF1 131 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 CFAP57Q96MR6 1250 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 GLT1D1Q96MS3 346 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 MTG1Q9BT17 334 aaPredicted RBP21.64■■□□□ 1.06
SNX3-201ENST00000230085 TUT1Q9H6E5 874 aaKnown RBP21.64■■□□□ 1.06
SNX3-201ENST00000230085 TMEM8AQ9HCN3 771 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 GABBR1Q9UBS5 961 aa21.64■■□□□ 1.06
SNX3-201ENST00000230085 MYH9P35579 1960 aaKnown RBP21.64■■□□□ 1.06
SNX3-201ENST00000230085 PEX11AO75192 247 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 F2P00734 622 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 KLRC2P26717 231 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 MARK3P27448 753 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 ADSSP30520 456 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 GCNT1Q02742 428 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 SPARCL1Q14515 664 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 UGCGQ16739 394 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 SGSM1Q2NKQ1 1148 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 PPP1R2P3Q6NXS1 205 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 TRMT1LQ7Z2T5 733 aaKnown RBP21.64■■□□□ 1.05
SNX3-201ENST00000230085 POP1Q99575 1024 aaKnown RBP21.64■■□□□ 1.05
SNX3-201ENST00000230085 SMARCAD1Q9H4L7 1026 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 ZNF302Q9NR11 478 aa21.64■■□□□ 1.05
SNX3-201ENST00000230085 A8MUI8 341 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 ZBTB39O15060 712 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 EDF1O60869 148 aaKnown RBP21.63■■□□□ 1.05
SNX3-201ENST00000230085 NCKAP1LP55160 1127 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.63■■□□□ 1.05
SNX3-201ENST00000230085 KATNAL2Q8IYT4 538 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 KAT5Q92993 513 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 SPDL1Q96EA4 605 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 FBXL18Q96ME1 805 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 RNPEPQ9H4A4 650 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 CYLDQ9NQC7 956 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 STARD7Q9NQZ5 370 aa21.63■■□□□ 1.05
SNX3-201ENST00000230085 MAFBQ9Y5Q3 323 aaPredicted RBP21.63■■□□□ 1.05
SNX3-201ENST00000230085 SCN10AQ9Y5Y9 1956 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 ATMINO43313 823 aaPredicted RBP21.62■■□□□ 1.05
SNX3-201ENST00000230085 COL6A1P12109 1028 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 ATP4AP20648 1035 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 LBRQ14739 615 aaKnown RBP21.62■■□□□ 1.05
SNX3-201ENST00000230085 SLC45A4Q5BKX6 768 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 SMYD5Q6GMV2 418 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 LRRC37BQ96QE4 947 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 CBWD1Q9BRT8 395 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 MYLK2Q9H1R3 596 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 CHKBQ9Y259 395 aa21.62■■□□□ 1.05
SNX3-201ENST00000230085 CABYRO75952 493 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 TPBGLP0DKB5 382 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 ATP6V1C1P21283 382 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 IBSPP21815 317 aaPredicted RBP21.61■■□□□ 1.05
SNX3-201ENST00000230085 MRPS35P82673 323 aaKnown RBP21.61■■□□□ 1.05
SNX3-201ENST00000230085 MFSD10Q14728 455 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 PLPPR4Q7Z2D5 763 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 CPNE8Q86YQ8 564 aa21.61■■□□□ 1.05
SNX3-201ENST00000230085 GDAP1Q8TB36 358 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms