RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ADGRA2Q96PE1 1338 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 STX7O15400 261 aaKnown RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 MEFVO15553 781 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 TFB1MQ8WVM0 346 aaKnown RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 KRT35Q92764 455 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 ZNF669Q96BR6 464 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 ERLEC1Q96DZ1 483 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 LZTS3O60299 673 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-201ENST00000223398 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 FBXO47Q5MNV8 452 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 FAM131BQ86XD5 332 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 UCMAQ8WVF2 138 aa19.24■□□□□ 0.67
CLIP2-201ENST00000223398 MYPNQ86TC9 1320 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 IGFBP4P22692 258 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 CYP24A1Q07973 514 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 TSPAN17Q96FV3 270 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 RBM12Q9NTZ6 932 aaKnown RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 VPS28Q9UK41 221 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 C1orf146Q5VVC0 180 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 SYDE1Q6ZW31 735 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 TRIM48Q8IWZ4 208 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 SFMBT1Q9UHJ3 866 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 MRPL42Q9Y6G3 142 aaKnown RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 ADCY3O60266 1144 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 UGP2Q16851 508 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 RFX8Q6ZV50 586 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 COPS5Q92905 334 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 KDM4CQ9H3R0 1056 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 POLBP06746 335 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 HOXA10P31260 410 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 RABGAP1LQ5R372 815 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 OVOS1Q6IE37 1185 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 DENND5BQ6ZUT9 1274 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 TRPM4Q8TD43 1214 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 FAM172AQ8WUF8 416 aa19.23■□□□□ 0.67
CLIP2-201ENST00000223398 MARCOQ9UEW3 520 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 DBR1Q9UK59 544 aaKnown RBP19.23■□□□□ 0.67
CLIP2-201ENST00000223398 HNRNPCL2B2RXH8 293 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 HNRNPCL1O60812 293 aaKnown RBP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 AARSP49588 968 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 CXCL17Q6UXB2 119 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 CISHQ9NSE2 258 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 DSEQ9UL01 958 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 RHOBTB1O94844 696 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 PGK1P00558 417 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 LHX1P48742 406 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 BCAT1P54687 386 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ZNF200P98182 395 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 DGKZQ13574 1117 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 BOLA3Q53S33 107 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 PKN3Q6P5Z2 889 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 EDEM1Q92611 657 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 PDGFDQ9GZP0 370 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 SMPD4Q9NXE4 827 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ITIH2P19823 946 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 CCDC15Q0P6D6 951 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ATP6V1G3Q96LB4 118 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 LRRC37BQ96QE4 947 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 SEMA6BQ9H3T3 888 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ADGRB1O14514 1584 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ZSCAN9O15535 394 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 SOX11P35716 441 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 LAMB3Q13751 1172 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 C3orf62Q6ZUJ4 267 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 EMC1Q8N766 993 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ASPSCR1Q9BZE9 553 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 KIF17Q9P2E2 1029 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 A0A1W2PQJ5 194 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 TKTL1P51854 596 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 VSNL1P62760 191 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 PPIL2Q13356 520 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 C6orf10Q5SRN2 563 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 E4F1Q66K89 784 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-201ENST00000223398 RGS9BPQ6ZS82 235 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 JAMLQ86YT9 394 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 WDR49Q8IV35 697 aa19.22■□□□□ 0.67
CLIP2-201ENST00000223398 ZBTB39O15060 712 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CKBP12277 381 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CYP11B1P15538 503 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 ALDH18A1P54886 795 aaKnown RBP19.21■□□□□ 0.67
CLIP2-201ENST00000223398 RRM2BQ7LG56 351 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 PURBQ96QR8 312 aaKnown RBP19.21■□□□□ 0.67
CLIP2-201ENST00000223398 RGS4P49798 205 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 ITGA8P53708 1063 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 OXCT1P55809 520 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 NAPEPLDQ6IQ20 393 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 OTULINQ96BN8 352 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 TMEM176AQ96HP8 235 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 RUBCNLQ9H714 662 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 ESRRGP62508 458 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CCZ1BP86790 482 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CCZ1P86791 482 aaPredicted RBP19.21■□□□□ 0.67
CLIP2-201ENST00000223398 LRRC8EQ6NSJ5 796 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 ERFP50548 548 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 PTK7Q13308 1070 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CUL3Q13618 768 aa19.21■□□□□ 0.67
CLIP2-201ENST00000223398 CBX4O00257 560 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 AMHP03971 560 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms