RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 EP400NLQ6ZTU2 488 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 VSTM4Q8IW00 320 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 ATAD1Q8NBU5 361 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 CYFIP2Q96F07 1278 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 SMARCD1Q96GM5 515 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 MRFAP1L1Q96HT8 127 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 SEPT5Q99719 369 aaPredicted RBP21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 TMLHEQ9NVH6 421 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 CLDND1Q9NY35 253 aa21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 AJAP1Q9UKB5 411 aaPredicted RBP21.44■■□□□ 1.02
RHBDD3-201ENST00000216085 FOXN3O00409 490 aaPredicted RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 LRG1P02750 347 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SPATA31D3P0C874 917 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 GNA15P30679 374 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 GTF2F1P35269 517 aaKnown RBP eCLIP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ALDH1A3P47895 512 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 DUSP4Q13115 394 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 PPM1LQ5SGD2 360 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 TMEM184AQ6ZMB5 413 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SPATA31D4Q6ZUB0 917 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 FAM71AQ8IYT1 594 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 C12orf29Q8N999 325 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SLC7A14Q8TBB6 771 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SLC2A14Q8TDB8 520 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 PABPC5Q96DU9 382 aaKnown RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 NUCKS1Q9H1E3 243 aaKnown RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SFXN1Q9H9B4 322 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ZDHHC7Q9NXF8 308 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 HESX1Q9UBX0 185 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 A0A1W2PQJ5 194 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ANXA13P27216 316 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 SOX5P35711 763 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 MAGEA11P43364 429 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 PDE6CP51160 858 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ZNF75DP51815 510 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 JAM2P57087 298 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 RPL10AP62906 217 aaKnown RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 CCDC85BQ15834 202 aaPredicted RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ARHGAP17Q68EM7 881 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 FAM35AQ86V20 835 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 ELMOD1Q8N336 334 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 HNRNPABQ99729 332 aaKnown RBP21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 INSL5Q9Y5Q6 135 aa21.43■■□□□ 1.02
RHBDD3-201ENST00000216085 TRIM66O15016 1216 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 FAM200BP0CF97 657 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 CCDC130P13994 396 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 HOXB8P17481 243 aaPredicted RBP21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 ADORA2BP29275 332 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 HOXA9P31269 272 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 ADAM15Q13444 863 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 KCNC3Q14003 757 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 VEPH1Q14D04 833 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 PPM1EQ8WY54 764 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 GPR88Q9GZN0 384 aa21.42■■□□□ 1.02
RHBDD3-201ENST00000216085 PLXNA3P51805 1871 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 CYP26A1O43174 497 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 THAP12O43422 761 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 ZMYND10O75800 440 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 HNRNPA1P09651 372 aaKnown RBP eCLIP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 BDNFP23560 247 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 GRIK1P39086 918 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 B3GNT5Q9BYG0 378 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 ZNF518BQ9C0D4 1074 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 TTYH3Q9C0H2 523 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 KRT82Q9NSB4 513 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 SLC27A5Q9Y2P5 690 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 LUC7L2Q9Y383 392 aaKnown RBP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 YIPF1Q9Y548 306 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 RNF225M0QZC1 329 aaPredicted RBP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 XYLBO75191 536 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 GFPT2O94808 682 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 HAPLN1P10915 354 aaPredicted RBP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 FERP16591 822 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 CCDC142Q17RM4 750 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 PPP1R26Q5T8A7 1209 aaPredicted RBP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 SCN4BQ8IWT1 228 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 FUKQ8N0W3 1084 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 CEP295NLQ96MC4 621 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 GRPEL1Q9HAV7 217 aa21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 DMAP1Q9NPF5 467 aaPredicted RBP21.41■■□□□ 1.02
RHBDD3-201ENST00000216085 AP5Z1O43299 807 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 AP1G2O75843 785 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 SEC24AO95486 1093 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 PNMA6AP0CW24 399 aaPredicted RBP21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 CYP2F1P24903 491 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 EPHB3P54753 998 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 COL19A1Q14993 1142 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 CTC1Q2NKJ3 1217 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 ANKRD54Q6NXT1 300 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 TMC6Q7Z403 805 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 VN1R2Q8NFZ6 395 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 MAFAQ8NHW3 353 aaPredicted RBP21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 LPIN3Q9BQK8 851 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 TSPAN16Q9UKR8 245 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 CAPN11Q9UMQ6 739 aa21.4■■□□□ 1.02
RHBDD3-201ENST00000216085 LRRC53A6NM62 1247 aa21.39■■□□□ 1.01
RHBDD3-201ENST00000216085 CLDN5O00501 218 aa21.39■■□□□ 1.01
RHBDD3-201ENST00000216085 LINC01565O15544 149 aa21.39■■□□□ 1.01
RHBDD3-201ENST00000216085 VNN2O95498 520 aa21.39■■□□□ 1.01
RHBDD3-201ENST00000216085 GLP2RO95838 553 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms