RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 CES5AQ6NT32 575 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 DPY19L2P1Q6NXN4 242 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 UNC93AQ86WB7 457 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SLC4A11Q8NBS3 891 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SLC2A14Q8TDB8 520 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 GIPC2Q8TF65 315 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SMG7Q92540 1137 aaKnown RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 PRKD2Q9BZL6 878 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ACP6Q9NPH0 428 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 CEP72Q9P209 647 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 PCDHB4Q9Y5E5 795 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SYCP1Q15431 976 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 PAQR9Q6ZVX9 377 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 GPR149Q86SP6 731 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYPL1-201ENST00000011473 SCN4BQ8IWT1 228 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 UBR7Q8N806 425 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 HDAC7Q8WUI4 952 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
SYPL1-201ENST00000011473 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
SYPL1-201ENST00000011473 C1RP00736 705 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 KRT5P13647 590 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 ADORA2BP29275 332 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 SSTR3P32745 418 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 ALDH1A3P47895 512 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 ITIH3Q06033 890 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 SMAD4Q13485 552 aaKnown RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 MTMR3Q13615 1198 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 C4orf50Q6ZRC1 276 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 CRYBG2Q8N1P7 616 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 KCNK16Q96T55 309 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 DNAJC12Q9UKB3 198 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 F8VP50 259 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 NRG2O14511 850 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 BEST1O76090 585 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 GRIK1P39086 918 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 USP8P40818 1118 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 TPM4P67936 248 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 FANCCQ00597 558 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 SMARCB1Q12824 385 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 CBX2Q14781 532 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 MAPRE1Q15691 268 aaKnown RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 FAM35AQ86V20 835 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 RBBP8NLQ8NC74 664 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 CMASQ8NFW8 434 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 CYFIP2Q96F07 1278 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 ASB2Q96Q27 587 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 CORO1BQ9BR76 489 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
SYPL1-201ENST00000011473 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
SYPL1-201ENST00000011473 NOL4O94818 638 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 HNRNPA1P09651 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 UCHL3P15374 230 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 CD19P15391 556 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 HOXA9P31269 272 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 TUFMP49411 452 aaKnown RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 MFAP3P55082 362 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 ATAT1Q5SQI0 421 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 ST13P5Q8NFI4 369 aaPredicted RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 SUSD6Q92537 303 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 JAKMIP2Q96AA8 810 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 FUBP3Q96I24 572 aaKnown RBP eCLIP12.79□□□□□ -0.362e-8■■■■□ 20.2
SYPL1-201ENST00000011473 KRT82Q9NSB4 513 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 MAGED2Q9UNF1 606 aaPredicted RBP12.79□□□□□ -0.36
SYPL1-201ENST00000011473 A0A1B0GTH6 734 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 XYLBO75191 536 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 RHOP08100 348 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 GJA1P17302 382 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 TFAP2BQ92481 460 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 NLRC4Q9NPP4 1024 aa12.79□□□□□ -0.36
SYPL1-201ENST00000011473 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms