RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Krt19P19001 403 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Btg3P50615 252 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Skap2Q3UND0 358 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Cyp2c29Q64458 490 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Foxo6Q70KY4 559 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ace2Q8R0I0 805 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fkbp6Q91XW8 327 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Sh2b1Q91ZM2 756 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 ArpinQ9D0A3 226 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Nr1h3Q9Z0Y9 445 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ms4a4aA0A087WRT7 236 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Zfp358E9Q8M1 571 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Samd15F6XZJ7 620 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Hoxb8P09632 243 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Krt42Q6IFX2 452 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ccdc25Q78PG9 208 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 C2cd5Q7TPS5 1016 aaKnown RBP27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Gcfc2Q8BKT3 769 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 McmbpQ8R3C0 642 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Isl2Q9CXV0 359 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Psmg1Q9JK23 289 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Kcnq4Q9JK97 696 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Adamts9E9PUN6 1931 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Zfp990B1AVN5 605 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Gm281D3Z1Y0 860 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Adamts19P59509 1210 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Atp8a1P70704 1164 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Rnf40Q3U319 1001 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Nr1d1Q3UV55 615 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Sh3gl2Q62420 352 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 CochQ62507 552 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Inppl1Q6P549 1257 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Rsl1d1Q8BVY0 452 aaKnown RBP27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Epn3Q91W69 636 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ugp2Q91ZJ5 508 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Grhl1Q921D9 618 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Trps1Q925H1 1281 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Oxct1Q9D0K2 520 aaKnown RBP27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Sept3Q9Z1S5 350 aa27.09■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Lmo2P25801 158 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Kcnj4P52189 445 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Q3TQQ9 903 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Cd300lfQ6SJQ7 337 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Erlin2Q8BFZ9 340 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 GopcQ8BH60 463 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fam126bQ8C729 530 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 NamptQ99KQ4 491 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 MtrexQ9CZU3 1040 aaKnown RBP27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Tnni1Q9WUZ5 187 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Anapc7Q9WVM3 565 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Krt16Q9Z2K1 469 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Rpl9-ps1S4R1R7 191 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 ZxdbA2CE44 873 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Mroh4G3X8W1 983 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 DffaO54786 331 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Slc1a2P43006 572 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Tmprss15P97435 1069 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 IhhP97812 411 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Lig4Q8BTF7 911 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fam163bQ8BUM6 167 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 NcaphQ8C156 731 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ddx47Q9CWX9 455 aaKnown RBP27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ecel1Q9JMI0 775 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Msl3Q9WVG9 525 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ptgdr2Q9Z2J6 382 aa27.08■■□□□ 1.93
Tpm1-216ENSMUST00000113707 D3Z070 196 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Olfr1354E9Q5G9 310 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Folh1O35409 752 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Opa1P58281 960 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Cfhr2Q4LDF6 332 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Scube3Q66PY1 993 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 EmsyQ8BMB0 1264 aaKnown RBP27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fbxo38Q8BMI0 1194 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Neto2Q8BNJ6 525 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Kat14Q8CID0 779 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 AclyQ91V92 1091 aaKnown RBP27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Wdr83Q9DAJ4 315 aaKnown RBP27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 St6galnac4Q9R2B6 360 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Slc22a3Q9WTW5 551 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Zfp236S4R299 1847 aa27.07■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Fam81bA0A140LI28 432 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Vti1aO89116 217 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Wfs1P56695 890 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 SbdsP70122 250 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Elf3Q3UPW2 391 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Bcar1Q61140 874 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Srrm3Q80WV7 648 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 MiosQ8VE19 875 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 RragcQ99K70 398 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Tsnaxip1Q99P25 704 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Cntnap4Q99P47 1310 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Col5a3Q9JLI2 1739 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Igf2rQ07113 2483 aaKnown RBP27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 E030030I06RikJ3QML9 246 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Pdk4O70571 412 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Lrrc6O88978 473 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Gap43P06837 227 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Itgb7P26011 806 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 Marcksl1P28667 200 aa27.06■■□□□ 1.92
Tpm1-216ENSMUST00000113707 LnpkQ7TQ95 425 aa27.06■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms