RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Plk1Q07832 603 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slitrk1Q810C1 696 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Bicd1Q8BR07 835 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Kcnc4Q8R1C0 628 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Arih2Q9Z1K6 492 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zfp236S4R299 1847 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zfp882E9Q4R4 555 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm3371F7CQW8 167 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Abcb1bP06795 1276 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 PrkchP23298 683 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Usp10P52479 792 aaKnown RBP16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Sesn2P58043 480 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gabrb2P63137 512 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rrp36Q3UFY0 244 aaKnown RBP16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Arhgap10Q6Y5D8 786 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Reps2Q80XA6 521 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tti1Q91V83 1085 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Fam49bQ921M7 324 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tmem86aQ9D8N3 241 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Mrpl4Q9DCU6 294 aaKnown RBP16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Nfu1Q9QZ23 255 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Mindy4b-psA0A1W2P7H6 457 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Apol7bB1AQP7 369 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 PdgfraP26618 1089 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cd86P42082 309 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 EnahQ03173 802 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Apol7eQ3UZ24 369 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Vps41Q5KU39 853 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Arl5cQ6P068 179 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 WtipQ7TQJ8 398 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Phf8Q80TJ7 1023 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Olfr1502Q8VG66 316 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 B4galt3Q91YY2 395 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Micu3Q9CTY5 523 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 GOLGA7BQ9D428 167 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Extl1Q9JKV7 669 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Olfr1305A2AVW3 312 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Clul1Q3ZRW6 464 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zfp658Q5PPQ4 887 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Traf3Q60803 567 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Znf235Q61116 645 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 MogsQ80UM7 834 aaKnown RBP16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Enoph1Q8BGB7 257 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pnma2Q8BHK0 365 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Wdr35Q8BND3 1181 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gramd4Q8CB44 633 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ugt3a2Q8JZZ0 523 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 McmbpQ8R3C0 642 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Mcrs1Q99L90 462 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Piwil1Q9JMB7 862 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Dlg3P70175 849 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 SPINDOCQ05AH6 381 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 HnrnpdQ60668 355 aaKnown RBP16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Olfr389Q7TRX7 312 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Kcnv1Q8BZN2 503 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Lonp1Q8CGK3 949 aaKnown RBP16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Hars2Q99KK9 505 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Psma8Q9CWH6 250 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rnf135Q9CWS1 417 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cuedc2Q9CXX9 284 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zcchc8Q9CYA6 709 aaKnown RBP16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Coro7Q9D2V7 922 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Stat2Q9WVL2 923 aa16.69■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ttc3O88196 1979 aaKnown RBP16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 AfpP02772 605 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rasgrf1P27671 1262 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Stmn1P54227 149 aaKnown RBP16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 IhhP97812 411 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tp53i13Q5F267 385 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Smtnl2Q8CI12 456 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gga1Q8R0H9 635 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ccdc137Q8R0K4 290 aaKnown RBP16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Plekhh3Q8VCE9 796 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm4756A0A140LIS8 335 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slc6a21A0A1B0GSD2 748 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zfp990B1AVN5 605 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 EgfP01132 1217 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 4930502E18RikQ14BQ3 236 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm4952Q5FW57 296 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Has1Q61647 583 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Fam102aQ78T81 392 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Arhgap15Q811M1 481 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 GnsQ8BFR4 544 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Dis3lQ8C0S1 1053 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gpc3Q8CFZ4 579 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Vmn1r203Q8R273 311 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Alas1Q8VC19 642 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tacc3Q9JJ11 631 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ecel1Q9JMI0 775 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Wdr95D3Z7A8 784 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 P01650 108 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 P01653 108 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slc1a2P43006 572 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Flt3Q00342 1000 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Kctd16Q5DTY9 427 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Jade1Q6ZPI0 834 aaKnown RBP16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Prdm4Q80V63 803 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Dus1lQ8C2P3 475 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Brat1Q8C3R1 822 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Spint1Q9R097 507 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 79.3 ms