RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Psmd2Q8VDM4 908 aa11.65□□□□□ -0.54
Ccdc60-202ENSMUST00000086483 Prss28Q924N9 274 aa11.65□□□□□ -0.54
Ccdc60-202ENSMUST00000086483 LpxnQ99N69 386 aa11.65□□□□□ -0.54
Ccdc60-202ENSMUST00000086483 Ndufv2Q9D6J6 248 aa11.65□□□□□ -0.54
Ccdc60-202ENSMUST00000086483 Arhgef7Q9ES28 862 aa11.65□□□□□ -0.54
Ccdc60-202ENSMUST00000086483 Usp24B1AY13 2617 aaKnown RBP11.65□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Mcm3apQ9WUU9 1971 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Lrrc38A2VDH3 298 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tmem235B1AQL3 211 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Srsf11E9Q6E5 511 aaKnown RBP11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ccdc149F6V035 524 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tal1P22091 329 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Adcy7P51829 1099 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cep295nlQ497N6 533 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Mtnr1aQ61184 353 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Pabpc2Q62029 628 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 DgkqQ6P5E8 934 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Defb34Q7TNV8 81 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cct8l1Q80YT3 562 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 TbckQ8BM85 762 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Sec62Q8BU14 398 aaKnown RBP11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gpr20Q8BYC4 358 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Samd3Q8C4H2 520 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Sik2Q8CFH6 931 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Zbtb6Q8K088 423 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Timd2Q8R183 305 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Slc39a5Q9D856 535 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Scn1aA2APX8 2009 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Plce1Q8K4S1 2282 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gm10722F6VLK5 217 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 EdaO54693 391 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 LdhcP00342 332 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 RargP18911 458 aaKnown RBP11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 TecP24604 630 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cntn5P68500 1098 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Prdx5P99029 210 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Sox8Q04886 464 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cntn3Q07409 1028 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 CtrcQ3SYP2 268 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gas2l3Q3UWW6 683 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 BadQ61337 204 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tatdn1Q6P8M1 295 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Zbtb46Q8BID6 600 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ccdc187Q8C5V8 958 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tmem168Q91VX9 697 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Papd4Q91YI6 484 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 NenfQ9CQ45 171 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Mms19Q9D071 1031 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Trpc7Q9WVC5 862 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gtf3c1Q8K284 2101 aa11.64□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Trpm6Q8CIR4 2028 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Igkv10-94A0A075B5L1 115 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Prdm12A2AJ77 365 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tlx3O55144 291 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 CremP27699 357 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cyp7b1Q60991 507 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Znf579Q80VM4 562 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Prkag3Q8BGM7 489 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Cox15Q8BJ03 413 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 EmsyQ8BMB0 1264 aaKnown RBP11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Me3Q8BMF3 604 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ccdc122Q8BVN0 290 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Hip1Q8VD75 1029 aaKnown RBP11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Trim12aQ99PQ1 284 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 ZwintQ9CQU5 252 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Q9D5Q8 446 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Dnajb8Q9QYI7 227 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 NumbQ9QZS3 653 aa11.63□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gm20403G3UYB0 123 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Kifc3O35231 824 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ptch2O35595 1182 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Nmt1O70310 496 aaKnown RBP11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gria2P23819 883 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 LxnP70202 222 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Wbp2P97765 261 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Epha2Q03145 977 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tstd2Q3U269 495 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Pak6Q3ULB5 682 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Zfp658Q5PPQ4 887 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Rsad1Q5SUV1 442 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Tbc1d12Q6A039 696 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Retreg2Q6NS82 541 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Arhgap10Q6Y5D8 786 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Olfm2Q8BM13 448 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ubald2Q8BQH4 164 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Agap1Q8BXK8 857 aaKnown RBP11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Slc24a5Q8C261 501 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Lrrc3bQ8VCH9 259 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Sh3d19Q91X43 789 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Kremen1Q99N43 473 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 PigkQ9CXY9 395 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ccdc94Q9D6J3 314 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Ush1cQ9ES64 910 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Hic2Q9JLZ6 619 aaKnown RBP11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Rai1Q61818 1889 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gm13089A2AGW7 455 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gm15091B1AZM2 449 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Gm4302E9PX25 294 aa11.62□□□□□ -0.55
Ccdc60-202ENSMUST00000086483 Taf4E9QAP7 1042 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms