RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Olfr845Q7TRG2 312 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ccdc169Q8BXX9 214 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Epha10Q8BYG9 1007 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Setd3Q91WC0 594 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Grk2Q99MK8 689 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PudpQ9D5U5 234 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tm9sf1Q9DBU0 606 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam205aA2APU8 1308 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc43a3A2AVZ9 502 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 H2-M9O19442 342 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hk1P17710 974 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Nol9Q3TZX8 714 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 CttnQ60598 546 aaKnown RBP10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc26a2Q62273 739 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Prkab2Q6PAM0 271 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Entpd3Q8BFW6 529 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tcaf1Q8BNE1 924 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Arhgap29Q8CGF1 1266 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Amotl2Q8K371 772 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc15a4Q91W98 574 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Eif2b2Q99LD9 351 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 NepnQ9CQ76 512 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Top3bQ9Z321 862 aaKnown RBP10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Atp8b4A2ANX3 1194 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 1700018F24RikB2RW27 314 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trim12cD3Z3L3 497 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Vmn2r70K7N702 854 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 TsksO54887 585 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cd3dP04235 173 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cma1P21844 247 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pou2f1P25425 770 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kcnj12P52187 427 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Erp29P57759 262 aaKnown RBP10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sec23aQ01405 765 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Col6a1Q04857 1025 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ccdc69Q3TCJ8 202 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Nfe2l1Q61985 741 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Nuak1Q641K5 658 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rbl1Q64701 1063 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tspan9Q8BJU2 239 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trim61Q8JZK6 461 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 UvragQ8K245 698 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 GaleQ8R059 347 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rnf31Q924T7 1066 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dach2Q925Q8 634 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cdca5Q9CPY3 264 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dbndd1Q9CZ00 160 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lsm12Q9D0R8 195 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Epb41l3Q9WV92 929 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ccdc88aQ5SNZ0 1873 aa10.15□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tex13cD3YU32 604 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ccdc13D3YV10 709 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tcea1P10711 301 aaKnown RBP10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rph3aP47708 681 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prox1P48437 737 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 BmxP97504 651 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Plk1Q07832 603 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Kctd21Q3URF8 260 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Armcx5Q3UZB0 606 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ccna1Q61456 421 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mtss1lQ6P9S0 715 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 BspryQ80YW5 473 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dhx32Q8BZS9 744 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sphk1Q8CI15 382 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 TgdsQ8VDR7 355 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PlvapQ91VC4 438 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sf3b3Q921M3 1217 aaKnown RBP10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Emilin1Q99K41 1017 aa10.15□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tns3Q5SSZ5 1440 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Phrf1A6H619 1682 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Itpripl1A2ASA8 547 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Vmn2r27D3YUK6 857 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc9a3G3X939 829 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ap1b1O35643 943 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dnase1l3O55070 310 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Aoc3O70423 765 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Nedd1P33215 660 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gas7Q60780 421 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cacna2d2Q6PHS9 1154 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Actn1Q7TPR4 892 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Q810N5 247 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm5622Q810Q0 167 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gprasp2Q8BUY8 826 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mterf4Q8BVN4 346 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ppp4r4Q8C0Y0 875 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 SucoQ8C341 1250 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 RadxQ8C779 850 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 NeproQ8R2U2 564 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Epm2aip1Q8VEH5 606 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 NifkQ91VE6 317 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mtif2Q91YJ5 727 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pdia6Q922R8 440 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rbm31yQ9D3U4 565 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prorsd1Q9D820 169 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Alg13Q9D8C3 1166 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sfmbt1Q9JMD1 863 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 A0A1Y7VML8 143 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Esp31A8R0W3 114 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm15155B1B034 138 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 DgkkE9Q7N4 1118 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms