RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Pde2aQ922S4 916 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Trim33Q99PP7 1142 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 PpihQ9D868 188 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tdrd1Q99MV1 1172 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ift46Q9DB07 301 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nusap1Q9ERH4 427 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Fam166bA2AIP0 273 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cyp4f17G3UW78 524 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Shoc2O88520 582 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 RarbP22605 482 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Epb41P48193 858 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nr2c1Q505F1 590 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmem117Q8BH18 514 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Dnajc9Q91WN1 259 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cyp4f16Q99N17 524 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Lsm7Q9CQQ8 103 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 CenpsQ9D084 142 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm28036V9GXJ1 658 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Galnt3P70419 633 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rbp1Q00915 135 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Eif3lQ8QZY1 564 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nfx1B1AY10 1114 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm379J3QQ19 296 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Hspa1bP17879 642 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 1700061G19RikQ08EE8 705 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Islr2Q5RKR3 745 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ripor1Q68FE6 1223 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sel1l3Q80TS8 1137 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Usp6nlQ80XC3 819 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ifi44Q8BV66 422 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pomgnt2Q8BW41 605 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Znf428Q8C1M2 176 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rftn2Q8CHX7 500 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Hacd3Q8K2C9 362 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Emc2Q9CRD2 297 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Klhl35Q9CZ49 574 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Hebp1Q9R257 190 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 B020011L13RikA0A087WQI7 412 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm3173A6NAS3 172 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm3020E9Q3J7 150 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm2897K7N6T7 172 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Kpna1Q60960 538 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Scd4Q6T707 353 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm3411Q8C7R2 150 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Syne4Q8CII8 388 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pcsk1nQ9QXV0 258 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pnpla7A2AJ88 1352 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Etnk2A7MCT6 385 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tubgcp6G5E8P0 1769 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rgs9O54828 675 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ccnd1P25322 295 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Znf219Q6IQX8 726 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Khdc3Q9CWU5 440 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gpr63Q9EQQ3 425 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Slfn2Q9Z0I6 378 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Serpinb3cA2RSF9 386 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cd86P42082 309 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 B3galnt2Q8BG28 504 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Fam49aQ8BHZ0 323 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Lrrc17Q9CXD9 443 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 PfkpQ9WUA3 784 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 1600015I10RikE9Q745 711 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 PtenO08586 403 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 TfamP40630 243 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Uhmk1P97343 419 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Exoc3l4Q6DIA2 721 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Zhx2Q8C0C0 836 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Slf1Q8R3P9 1054 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Abtb1Q99LJ2 478 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tjp2Q9Z0U1 1167 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Slfn3A0A1L1STQ7 640 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Bcat1P24288 386 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ptcd3Q14C51 685 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Klra7Q60654 280 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 CtcfQ61164 736 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Hist2h2acQ64523 129 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Chmp2bQ8BJF9 213 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nckap1lQ8K1X4 1134 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tbc1d22aQ8R5A6 516 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 NclnQ8VCM8 563 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Olfr866Q8VFI7 312 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 MutyhQ99P21 515 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sema4dO09126 861 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 DcakdQ8BHC4 231 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Stk33Q924X7 491 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Scgb2b18A0A087WPA9 112 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Spin2fJ3QPU0 254 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cdo1P60334 200 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Lpar1P61793 364 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Dusp19Q8K4T5 220 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Serpina3nQ91WP6 418 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pcdha10Q91Y20 946 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 OoepQ9CWE6 164 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sept12Q9D451 317 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Phtf1Q9QZ09 761 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Bpifb9bA2AJD1 591 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pcbp1P60335 356 aaKnown RBP10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Psd3Q2PFD7 1037 aa10.84□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Capn13Q3UW68 665 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 105.9 ms