RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Dcaf11Q91VU6 549 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Adgre4Q91ZE5 689 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 LsrQ99KG5 594 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Naalad2Q9CZR2 740 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 EurlQ9D7G4 290 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pidd1Q9ERV7 915 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Dnajb9Q9QYI6 222 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Dnajb8Q9QYI7 227 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fxr2Q9WVR4 673 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tjp2Q9Z0U1 1167 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 StrapQ9Z1Z2 350 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ubn2Q80WC1 1314 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Col15a1O35206 1367 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Scn7aB1AYL1 1681 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm1993A6X8I0 212 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Zscan29E9Q5B4 869 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Atf6F6VAN0 656 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Samd15F6XZJ7 620 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Hoxb7P09024 217 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gsta2P10648 222 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cbx3P23198 183 aaKnown RBP9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gjb1P28230 283 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sdr16c6Q05A13 316 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lpcat1Q3TFD2 534 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm5935Q497S0 212 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm10488Q4KL05 212 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mfsd3Q5U419 412 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 HrQ61645 1182 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pabpc2Q62029 628 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Zpr1Q62384 459 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm14819Q62478 212 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ncapg2Q6DFV1 1138 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Snx17Q8BVL3 470 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 4921511C20RikQ8BVT7 469 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Galnt5Q8C102 930 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Thap1Q8CHW1 210 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fam20aQ8CID3 541 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kcnj14Q8JZN3 434 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lrit1Q8K099 624 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Btbd6Q8K2J9 488 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ankrd1Q9CR42 319 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ephx1Q9D379 455 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Taf1dQ9D4V4 322 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 ClcnkaQ9WUB7 687 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Suclg2Q9Z2I8 433 aa9.56□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Serpinb6bO08804 377 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cyp27b1O35084 507 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rbbp9O88851 186 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ctnnd1P30999 938 aaKnown RBP9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ripk2P58801 539 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sirt6P59941 334 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kcna7Q17ST2 489 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fam189bQ5HZJ5 669 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sh3gl2Q62420 352 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pfkfb4Q6DTY7 469 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 OcrlQ6NVF0 900 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Herc4Q6PAV2 1057 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lrrn2Q6PHP6 730 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Olfr1080Q7TR67 313 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Supt20hQ7TT00 530 aaKnown RBP9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trim62Q80V85 475 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Q80ZQ3 298 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trmt2bQ8BQJ6 493 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rft1Q8C3B8 541 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pcdhb7Q8CDY9 829 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trim31Q8R0K2 507 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 PpcsQ8VDG5 311 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Uba5Q8VE47 403 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Olfr784Q8VFZ9 319 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 HnmtQ91VF2 295 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Bzw2Q91VK1 419 aaKnown RBP9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gpr108Q91WD0 569 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Xrcc4Q924T3 326 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Uqcc2Q9CQY6 136 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Exosc5Q9CRA8 235 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ptk2bQ9QVP9 1009 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 ArntlQ9WTL8 632 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 4932429P05RikA2ADI4 785 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm12800B1AUV4 484 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Kif6E9PX57 802 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Vps51Q3UVL4 782 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 SctrQ5FWI2 447 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Leo1Q5XJE5 667 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Nr2f1Q60632 422 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ccne1Q61457 408 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cyp24a1Q64441 514 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Zranb3Q6NZP1 1069 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Znf574Q8BY46 900 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tinagl1Q99JR5 466 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Snx29Q9D3S3 818 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 S100pbpQ9D5K4 396 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Tspan17Q9D7W4 270 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ppp1r35Q9D8C8 260 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mnx1Q9QZW9 404 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Nek4Q9Z1J2 792 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Epb41l1Q9Z2H5 879 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ptgdr2Q9Z2J6 382 aa9.55□□□□□ -0.88
Upf3b-201ENSMUST00000076265 IbtkQ6ZPR6 1352 aaKnown RBP9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cul4bA2A432 970 aaKnown RBP9.54□□□□□ -0.88
Upf3b-201ENSMUST00000076265 C9P06683 548 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms