RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Fbxl13Q8CDU4 790 aa16.27■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Ndufaf1Q9CWX2 328 aa16.27■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Sgf29Q9DA08 293 aaKnown RBP16.27■□□□□ 0.2
Ubr3-201ENSMUST00000055758 Col1a2Q01149 1372 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Kiaa1107Q80TK0 1369 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 E2f7Q6S7F2 904 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Chaf1bQ9D0N7 572 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Hmg20aQ9DC33 346 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Actl7aQ9QY84 440 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Ccne2Q9Z238 404 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Dennd4bQ3U1Y4 1499 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nme9A0A1L1SUL6 329 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Aldh3a2P47740 484 aa16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Rps7P62082 194 aaKnown RBP16.27■□□□□ 0.19
Ubr3-201ENSMUST00000055758 EXOC1LB9EK06 172 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Psmd7P26516 321 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gsta3P30115 221 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Zfyve1Q810J8 777 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Olfml2aQ8BHP7 681 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gcfc2Q8BKT3 769 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Cpne3Q8BT60 533 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Eps8l1Q8R5F8 716 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Cyp3a59D3Z2W7 503 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 MntO08789 591 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Kcnb1Q03717 857 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Rrp36Q3UFY0 244 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 MyrfQ3UR85 1138 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 PighQ5M9N4 188 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Zbtb39Q6PDK0 712 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Tldc1Q8K0P3 455 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Mccc1Q99MR8 717 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Fhod3Q76LL6 1578 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gm17093F6XGJ4 214 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Cpa3P15089 417 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Scg3P47867 471 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Akr1c6P70694 323 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Ccdc134Q8C7V8 229 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Rfc4Q99J62 364 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Khdrbs3Q9R226 346 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Top3bQ9Z321 862 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gm13023A2A8N2 498 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nfx1B1AY10 1114 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 CybbQ61093 570 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Lcp1Q61233 627 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 R3hdm2Q80TM6 1044 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Olfr726E9Q8X3 321 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Pex5O09012 639 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Trappc3O55013 180 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Sema3fO88632 785 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 GabrdP22933 449 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Olfr725Q05A45 321 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Iqcf4Q6P8Y2 204 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Olfr832Q7TRG9 312 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Tmem145Q8C4U2 746 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Tagln3Q9R1Q8 199 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Patl2A2ARM1 529 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Hk2O08528 917 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 OmdO35103 423 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Kctd21Q3URF8 260 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Krt40Q6IFX3 439 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Fhod1Q6P9Q4 1197 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Tdpoz3Q717B4 365 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Spef1Q99JL1 234 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Mageb16Q9CWV4 363 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Npas2P97460 816 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 CamkvQ3UHL1 512 aa16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Thrap3Q569Z6 951 aaKnown RBP16.26■□□□□ 0.19
Ubr3-201ENSMUST00000055758 CnpP16330 420 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Fgfr4Q03142 799 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Trim67Q505D9 768 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Vmn1r209Q5NC97 312 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Itih2Q61703 946 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Clip4Q8CI96 704 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nox1Q8CIZ9 591 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Mta3Q924K8 591 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Dlc1Q9R0Z9 1092 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Psma4Q9R1P0 261 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nup160Q9Z0W3 1402 aaKnown RBP16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Arhgef26D3YYY8 869 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nedd8P29595 81 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Zbtb1Q91VL9 713 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Nipsnap3bQ9CQE1 247 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Thap11Q9JJD0 305 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Atp6v1g2Q9WTT4 118 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gm5415E9PXF3 478 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Cyp17a1P27786 507 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 LxnP70202 222 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Aqp1Q02013 269 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Cyp2j11Q3UNV2 504 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Ifi205aQ8CGE8 404 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Stx5Q8K1E0 355 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Lgi2Q8K4Z0 550 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Mrpl19Q9D338 292 aaKnown RBP16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Terb2Q9D494 218 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Sh3glb1Q9JK48 365 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Hebp1Q9R257 190 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Mtmr1Q9Z2C4 669 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 MeiocA2AG06 965 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 RalaP63321 206 aa16.25■□□□□ 0.19
Ubr3-201ENSMUST00000055758 Gpd1lQ3ULJ0 351 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms