RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pde1cQ64338 706 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gpr151Q7TSN6 422 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ube2q1Q7TSS2 422 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Slc20a2Q80UP8 656 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ankrd45Q810N6 248 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 DcakdQ8BHC4 231 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Spata2Q8K004 515 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 C1qtnf12Q8R2Z0 308 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 TxlnbQ8VBT1 685 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Smc1aQ9CU62 1233 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cuedc2Q9CXX9 284 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Acot1O55137 419 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 AcrP23578 436 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ercc5P35689 1170 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Arpp19P56212 112 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Runx2Q08775 607 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q3TQQ9 903 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ttc9Q3V038 219 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 UrgcpQ5NCI0 926 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Zfp658Q5PPQ4 887 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 CttnQ60598 546 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dnajc16Q80TN4 772 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 CyldQ80TQ2 952 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Creb3l2Q8BH52 521 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Snip1Q8BIZ6 383 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pnpla2Q8BJ56 486 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Slc9a4Q8BUE1 797 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cfap36Q8C6E0 343 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 H6pdQ8CFX1 789 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ero1aQ8R180 464 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Eml3Q8VC03 897 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rtn3Q9ES97 964 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Atp1a4Q9WV27 1032 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ggt5Q9Z2A9 573 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Baz2bA2AUY4 2123 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cyp4a29A0A087WPC3 509 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 1700001O22RikA2APZ1 375 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Grik3B1AS29 919 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm6121L7MUF1 212 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr743L7N1Y2 311 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fgfr1P16092 822 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ly6dP35459 127 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Usp17laQ61068 526 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Txndc8Q69AB2 127 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ccdc117Q6PB51 277 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rad9bQ6WBX7 403 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rhbdf2Q80WQ6 827 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Zfp120Q8BZW4 436 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Leng8Q8CBY3 785 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Sept8Q8CHH9 429 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Usp15Q8R5H1 981 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr356Q8VFP5 315 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 SfpqQ8VIJ6 699 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rpa3Q9CQ71 121 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mrpl4Q9DCU6 294 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Trpv2Q9WTR1 756 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lrrc74aA0A1Y7VMD6 494 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm10720D3Z1I5 223 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Edil3O35474 480 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lhx5P61375 402 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Vsnl1P62761 191 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 WasP70315 520 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 4930502E18RikQ14BQ3 236 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Hhla1Q3TYV2 514 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Xkr5Q5GH66 676 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Inppl1Q6P549 1257 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr212Q7TS33 327 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Hpcal4Q8BGZ1 191 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Bpifb6Q8BU51 449 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ttc39bQ8BYY4 617 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 KyQ8C8H8 661 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 PhykplQ8R1K4 467 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ctage5Q8R311 779 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pbx4Q99NE9 378 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rnf138rt1Q9D9M9 248 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 TheglQ9DA15 459 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gdap2Q9DBL2 498 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pcsk1nQ9QXV0 258 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 CtsfQ9R013 462 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm43951A0A0N4SUT6 962 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cfap221A9Q751 836 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Arhgef26D3YYY8 869 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm3002E9PW72 216 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Farp1F8VPU2 1048 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 TktP40142 623 aaKnown RBP9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cdr2P97817 455 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Anks6Q6GQX6 883 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Foxo6Q70KY4 559 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Phf24Q80TL4 400 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Kbtbd3Q8BHI4 607 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fam228aQ8CDW1 299 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Kat14Q8CID0 779 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pcdha11Q91Y19 950 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q922C1 641 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q9D4A5 307 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Abcg8Q9DBM0 673 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rdh14Q9ERI6 334 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tle2Q9WVB2 767 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Nr1h3Q9Z0Y9 445 aa9.17□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mtmr7Q9Z2C9 660 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms