RNA–Protein interactions for RNA: ENSMUST00000041569.4

Ccdc113-201, Transcript of Coiled-coil domain-containing protein 113, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc113, Length 1,288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc113-201ENSMUST00000041569 Ndst4Q9EQW8 872 aa13.71□□□□□ -0.21
Ccdc113-201ENSMUST00000041569 Dkc1Q9ESX5 509 aaKnown RBP13.71□□□□□ -0.21
Ccdc113-201ENSMUST00000041569 Habp4Q9JKS5 411 aaKnown RBP13.71□□□□□ -0.21
Ccdc113-201ENSMUST00000041569 Rnf103Q9R1W3 683 aa13.71□□□□□ -0.21
Ccdc113-201ENSMUST00000041569 Mcm3apQ9WUU9 1971 aa13.71□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Col12a1Q60847 3120 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gm5483B2RV77 97 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Pcsk6F6XJP7 959 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 H2-T24F8VQG4 363 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Pgrmc1O55022 195 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ctnnal1O88327 731 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Zfp1P08042 402 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 PtpaP58389 323 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Grin2cQ01098 1239 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gsdmc2Q2KHK6 480 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gsdmc4Q3TR54 480 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Grik1Q60934 836 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ift88Q61371 824 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Six2Q62232 296 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Snx19Q6P4T1 997 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Dhx40Q6PE54 779 aaKnown RBP13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ppm1eQ80TL0 749 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 SnphQ80U23 495 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Trim65Q8BFW4 522 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Tmx3Q8BXZ1 456 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gsdmc3Q8CB12 480 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gas2l1Q8JZP9 678 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gtpbp10Q8K013 366 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ace2Q8R0I0 805 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Nxnl1Q8VC33 217 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Hip1Q8VD75 1029 aaKnown RBP13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Pcdha11Q91Y19 950 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ttc1Q91Z38 292 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Fam49bQ921M7 324 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Mrps2Q924T2 291 aaKnown RBP13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Cpxm2Q9D2L5 764 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Grtp1Q9D3N8 359 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Slc39a5Q9D856 535 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Cfap45Q9D9U9 551 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Itga2bQ9QUM0 1033 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Kcnd2Q9Z0V2 630 aa13.7□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ces1bD3Z5G7 567 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Tnfrsf18O35714 228 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 TyrP11344 533 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Anxa5P48036 319 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Trim72Q1XH17 477 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Zfp51Q3U4L8 781 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Agxt2Q3UEG6 513 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Srbd1Q497V5 1015 aaKnown RBP13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Spire1Q52KF3 598 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Olfr8Q60892 310 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Smarcd1Q61466 515 aaKnown RBP13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Eif2b4Q61749 524 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Krt39Q6IFX4 482 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Prmt8Q6PAK3 394 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 R3hdm2Q80TM6 1044 aaKnown RBP13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Slc20a2Q80UP8 656 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 RragaQ80X95 313 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 D130040H23RikQ8BII3 405 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Fbxo38Q8BMI0 1194 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Csnk1g1Q8BTH8 459 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Zmiz2Q8CIE2 920 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 FntbQ8K2I1 437 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Tbc1d19Q8VDV7 526 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Dlg2Q91XM9 852 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Synpo2Q91YE8 1087 aaKnown RBP13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 AdarQ99MU3 1178 aaKnown RBP13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Mtif3Q9CZD5 276 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 ArskQ9D2L1 553 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Pebp4Q9D9G2 242 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Cmtr1Q9DBC3 837 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Adamts5Q9R001 930 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Klra10Q9R1G6 266 aa13.69□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Rabgap1lA6H6A9 815 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Skint8A7XV07 398 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gm10720D3Z1I5 223 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Foxm1O08696 760 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Aff1O88573 1216 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Hmga1P17095 107 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gnat1P20612 350 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Gabrr2P56476 465 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Usp46P62069 366 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 YwhaeP62259 255 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ybx1P62960 322 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Vamp7P70280 220 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Ptgs2Q05769 604 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Q3TQQ9 903 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Cyfip2Q5SQX6 1253 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Elavl4Q61701 385 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Atg9bQ6EBV9 922 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Abcf1Q6P542 837 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Tmem164Q6PHN7 296 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Mindy1Q76LS9 468 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Stk40Q7TNL3 435 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Defb34Q7TNV8 81 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Znf598Q80YR4 908 aaKnown RBP13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 CptpQ8BS40 216 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Rcor2Q8C796 523 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Traf3ip2Q8N7N6 555 aa13.68□□□□□ -0.22
Ccdc113-201ENSMUST00000041569 Slc35f5Q8R314 524 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms