RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gm5737A0A140LI11 423 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gm1141B9EJU1 475 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ace3D0G895 737 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fbxl18E9PYR1 771 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ctnnd2O35927 1247 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 FosP01101 380 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ppp3ccP48455 513 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lypla1P97823 230 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rgs9bpQ148R9 237 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Samd11Q1RNF8 542 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ece1Q4PZA2 769 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 4930503B20RikQ80ZP0 234 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Thnsl1Q8BH55 747 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Serpinb10Q8K1K6 397 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gtf2a1lQ8R4I4 468 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Slc35c2Q8VCX2 364 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ing3Q8VEK6 421 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Plcb4Q91UZ1 1175 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Trex1Q91XB0 314 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Thumpd2Q9CZB3 528 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Drc3Q9D5E4 523 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Smad9Q9JIW5 430 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cyp2a22B2RXZ2 492 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 ArP19091 899 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Nedd8P29595 81 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fermt1P59113 677 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 UcmaQ14BU0 138 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Klra3Q64329 266 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rps6ka6Q7TPS0 764 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rnaseh2bQ80ZV0 308 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Dlgap2Q8BJ42 1059 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Haus8Q99L00 373 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 GsdmcQ99NB5 468 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tmem81Q9D5K1 259 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pitpnm2Q6ZPQ6 1335 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Herc6F2Z461 1003 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Orc4O88708 433 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Serpina1aP07758 413 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pik3r1P26450 724 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ptpn5P54830 541 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Flt3Q00342 1000 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ulk3Q3U3Q1 472 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 R3hdm4Q4VBF2 262 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Atg4cQ811C2 458 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Dcun1d2Q8BZJ7 259 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gprc5cQ8K3J9 440 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Olfr390Q8VEZ7 311 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Yipf1Q91VU1 306 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zmat2Q9CPW7 199 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Clvs1Q9D4C9 354 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 PalmdQ9JHU2 551 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ly75Q60767 1723 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Osbpl7A2A716 963 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fam155bA2BDP1 471 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Apba3O88888 571 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 RarbP22605 482 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ckmt1P30275 418 aaKnown RBP11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 NppbP40753 121 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 FancbQ5XJY6 703 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Als2clQ60I26 952 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 ThtpaQ8JZL3 224 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Slc25a38Q91XD8 326 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 St7Q99M96 577 aa11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fxr2Q9WVR4 673 aaKnown RBP11.12□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Col3a1P08121 1464 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Akap17bA2A3V1 959 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Nccrp1G3X9C2 266 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Sephs2P97364 452 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cyp2j11Q3UNV2 504 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Nsun6Q7TS68 476 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 C2cd2lQ80X80 706 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ago4Q8CJF8 861 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lsm14aQ8K2F8 462 aaKnown RBP11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Def8Q99J78 448 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Med24Q99K74 987 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ddx56Q9D0R4 546 aaKnown RBP11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Sun1Q9D666 913 aaKnown RBP11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rcan1Q9JHG6 198 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccdc120A2AEV7 629 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Bpifb9bA2AJD1 591 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 EloblA6PWE0 161 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Prl3b1P09586 222 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 PdgfraP26618 1089 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 OatP29758 439 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Psmc5P62196 406 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Xlr3aQ60595 226 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Znf148Q61624 794 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gemin4Q6P6L6 1058 aaKnown RBP11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cfap206Q6PE87 622 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ip6k2Q80V72 448 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Bpifb9aQ80XI7 591 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gpr180Q8BPS4 441 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tmc7Q8C428 726 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lars2Q8VDC0 902 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Setd3Q91WC0 594 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Stk33Q924X7 491 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Chst12Q99LL3 419 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Bscl2Q9Z2E9 383 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gm3371F7CQW8 167 aa11.11□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Anxa8O35640 327 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms