RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Snx9Q91VH2 595 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cyp2c50Q91X77 490 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Map4k3Q99JP0 894 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Usp11Q99K46 921 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Trpm5Q9JJH7 1158 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rfx5Q9JL61 658 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Homer2Q9QWW1 354 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Slc22a3Q9WTW5 551 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mbtps1Q9WTZ2 1052 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Scgb2b12S4R2L0 112 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 AspgA0JNU3 564 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mmrn1B2RPV6 1210 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ccdc170D3YXL0 722 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Hsd17b14E9Q3D4 273 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 VimP20152 466 aaKnown RBP8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ca8P28651 291 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rab20P35295 233 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Uhmk1P97343 419 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tax1bp1Q3UKC1 814 aaKnown RBP8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Icam5Q60625 917 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Usp6nlQ80XC3 819 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ttc22Q8C159 568 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Pnpt1Q8K1R3 783 aaKnown RBP8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 GneQ91WG8 722 aaKnown RBP8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cdc26Q99JP4 85 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 MsraQ9D6Y7 233 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 LrmdaQ9D9B4 229 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 NumbQ9QZS3 653 aa8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Wdr46Q9Z0H1 622 aaKnown RBP8.22□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ms4a4aA0A087WRT7 236 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Dennd5bA2RSQ0 1274 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ccdc8D3YZV8 685 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Farp1F8VPU2 1048 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gm7694J3QNH8 270 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Dpysl4O35098 572 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Kpna6O35345 536 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Sh3bp1P55194 680 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gbp1Q01514 589 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Sppl2bQ3TD49 578 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Spout1Q3UHX9 385 aaKnown RBP8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ccdc114Q3UX62 658 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ndufaf2Q59J78 168 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Zdhhc19Q810M5 347 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Taf5Q8C092 801 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Olfr1502Q8VG66 316 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Senp2Q91ZX6 588 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 RragcQ99K70 398 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Edf1Q9JMG1 148 aaKnown RBP8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Egfl7Q9QXT5 275 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 TfgQ9Z1A1 397 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Itgb4A2A863 1818 aa8.21□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 OgdhlE9Q7L0 1029 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ctnnal1O88327 731 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ap1g2O88512 791 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Vti1aO89116 217 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 EgfP01132 1217 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Sept4P28661 478 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Cdo1P60334 200 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 CiitaP79621 1155 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fam172aQ3TNH5 417 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Atp13a5Q3TYU2 1216 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Cyp4f37Q3V1F1 546 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Olfr8Q60892 310 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Has1Q61647 583 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 CochQ62507 552 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Klra3Q64329 266 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Lsm8Q6ZWM4 96 aaKnown RBP8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 TwistnbQ78WZ7 330 aaKnown RBP8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Creb3l2Q8BH52 521 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Rassf2Q8BMS9 326 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Il33Q8BVZ5 266 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fam78aQ8C552 283 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Tp53inp2Q8CFU8 221 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 PhykplQ8R1K4 467 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Mob2Q8VI63 235 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Fam173bQ9D1Z3 247 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Prpf4Q9DAW6 521 aaKnown RBP8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Slc26a3Q9WVC8 757 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Kif5cP28738 956 aaKnown RBP8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Brcc3P46737 291 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Hexim2Q3TVI4 313 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Ttc9Q3V038 219 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 PighQ5M9N4 188 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 FntaQ61239 377 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 ChpfQ6IQX7 774 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Dusp11Q6NXK5 321 aaKnown RBP8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Adam39Q7M762 756 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Nek5Q7TSC3 627 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Pak4Q8BTW9 593 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Wdr98Q8VC42 657 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Tmco4Q91WU4 631 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Q922R1 422 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Rilpl2Q99LE1 197 aa8.21□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Gm3460E9QAI8 215 aa8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 TyrobpO54885 114 aa8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Eif3eP60229 445 aaKnown RBP8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Surf6P70279 355 aaKnown RBP8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Znf598Q80YR4 908 aaKnown RBP8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Enoph1Q8BGB7 257 aa8.2□□□□□ -1.1
Ccdc39-201ENSMUST00000029222 Wdr35Q8BND3 1181 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms