RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Rap1gapA2ALS5 663 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Maml3D4QGC2 1135 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Spata31d1dE9Q5W2 1247 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 HalP35492 657 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Smyd1P97443 490 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Arhgap17Q3UIA2 846 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Klhdc9Q3USL1 350 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Ankrd34bQ3UUF8 508 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pik3r5Q5SW28 871 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Xlr3aQ60595 226 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Slc39a13Q8BZH0 361 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Tdrd7Q8K1H1 1086 aaKnown RBP13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Lars2Q8VDC0 902 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Dis3Q9CSH3 958 aaKnown RBP13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Pdpk1Q9Z2A0 559 aa13.21□□□□□ -0.29
Msh6-201ENSMUST00000005503 Abcb11Q9QY30 1321 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mcf2A2AEU1 1111 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gm45837F7D3W5 961 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Magea1O89006 320 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Magea5O89009 320 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rb1P13405 921 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 RarbP22605 482 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 ItgalP24063 1163 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 PhexP70669 749 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ccndbp1Q3TVC7 356 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 GancQ8BVW0 898 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pde2aQ922S4 916 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Oma1Q9D8H7 521 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Vav3Q9R0C8 847 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Magea2Q9R2A2 320 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Arap3Q8R5G7 1538 aa13.21□□□□□ -0.3
Msh6-201ENSMUST00000005503 Vmn2r104E9Q2J5 860 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Bcat1P24288 386 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rab17P35292 214 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rps6ka6Q7TPS0 764 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 TdrkhQ80VL1 560 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 PpatQ8CIH9 517 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Alas1Q8VC19 642 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Stk33Q924X7 491 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Sgf29Q9DA08 293 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ubiad1Q9DC60 336 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tnni1Q9WUZ5 187 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Col14a1Q80X19 1797 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tnip3A0A1D5RMN0 279 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Dhx35A2ACQ1 703 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slc4a9E9PUP3 929 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Serpinb3aG3X9V8 387 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Gm3402K7N5P2 326 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Six2Q62232 296 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 NkrfQ8BY02 690 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Dus1lQ8C2P3 475 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tbrg4Q91YM4 630 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ttc30a1Q99J38 664 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tdrd12Q9CWU0 1215 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Actrt1Q9D9J3 376 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tcirg1Q9JHF5 834 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Sh2b2Q9JID9 621 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Olig1Q9JKN5 260 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pcdh9F8VPK8 1237 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Shoc2O88520 582 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Fam167bP17257 162 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rab21P35282 222 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Rbm20Q3UQS8 1199 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Grid1Q61627 1009 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Wasf2Q8BH43 497 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tcaf1Q8BNE1 924 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Sept10Q8C650 452 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Slc51aQ8R000 340 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ndufaf1Q9CWX2 328 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Cul2Q9D4H8 745 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Trpc4Q9QUQ5 974 aa13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ddx39bQ9Z1N5 428 aaKnown RBP13.2□□□□□ -0.3
Msh6-201ENSMUST00000005503 Lilra5D3Z7A9 295 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 BtkP35991 659 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Znf112Q0VAW7 879 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ppm1jQ149T7 507 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pih1d3Q3KNI6 218 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ceacam5Q3UKK2 947 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Pdp2Q504M2 532 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Fam160a1Q505K2 1081 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tpp2Q64514 1262 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Fcho1Q8K285 873 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Stard7Q8R1R3 373 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 CygbQ9CX80 190 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ndufa13Q9ERS2 144 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 AuhQ9JLZ3 314 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ccdc88cQ6VGS5 2009 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ms4a14A0A087WSD2 1232 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Atf6F6VAN0 656 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Morc3F7BJB9 942 aaKnown RBP13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Top3aO70157 1003 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Ccdc153P0C7Q1 202 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Hspa1lP16627 641 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mapk4Q6P5G0 583 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Nsun6Q7TS68 476 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Fbxo44Q8BK26 255 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Tyw3Q8BSA9 257 aa13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 Mtif2Q91YJ5 727 aaKnown RBP13.19□□□□□ -0.3
Msh6-201ENSMUST00000005503 PawrQ925B0 333 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms