RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 BUB2P26448 306 aaPredicted RBP-1.87□□□□□ -2.71
snR48snR48 YPR153WQ06537 140 aa-1.87□□□□□ -2.71
snR48snR48 SPA2P23201 1466 aaKnown RBP-1.88□□□□□ -2.71
snR48snR48 NHP6AP11632 93 aaKnown RBP-1.88□□□□□ -2.71
snR48snR48 YKL102CP34249 101 aa-1.88□□□□□ -2.71
snR48snR48 RCF2P53721 224 aa-1.88□□□□□ -2.71
snR48snR48 SHH4Q06236 168 aa-1.88□□□□□ -2.71
snR48snR48 RAD9P14737 1309 aa-1.89□□□□□ -2.71
snR48snR48 TTI2P47168 421 aa-1.89□□□□□ -2.71
snR48snR48 RFU1Q08003 200 aa-1.89□□□□□ -2.71
snR48snR48 YDL085C-AQ3E7B7 68 aaKnown RBP-1.89□□□□□ -2.71
snR48snR48 MHF1Q3E835 90 aa-1.89□□□□□ -2.71
snR48snR48 TAH1P25638 111 aaPredicted RBP-1.9□□□□□ -2.71
snR48snR48 AHC2P25649 128 aa-1.9□□□□□ -2.71
snR48snR48 ATX1P38636 73 aa-1.9□□□□□ -2.71
snR48snR48 VPS55P47111 140 aa-1.9□□□□□ -2.71
snR48snR48 YNR064CP53750 290 aa-1.9□□□□□ -2.71
snR48snR48 IRC19Q07843 230 aa-1.9□□□□□ -2.71
snR48snR48 BRX1Q08235 291 aaKnown RBP-1.9□□□□□ -2.71
snR48snR48 YHR213WP0CI67 198 aa-1.91□□□□□ -2.72
snR48snR48 YNL019CP53975 284 aa-1.91□□□□□ -2.72
snR48snR48 NMT1P14743 455 aa-1.92□□□□□ -2.72
snR48snR48 SRP102P36057 244 aaPredicted RBP-1.92□□□□□ -2.72
snR48snR48 FES1P38260 290 aa-1.92□□□□□ -2.72
snR48snR48 HUT1Q12520 339 aa-1.92□□□□□ -2.72
snR48snR48 NUF2P33895 451 aa-1.93□□□□□ -2.72
snR48snR48 MRPL11P36521 249 aaPredicted RBP-1.93□□□□□ -2.72
snR48snR48 FMP32P43557 207 aa-1.93□□□□□ -2.72
snR48snR48 ARL3Q02804 198 aa-1.93□□□□□ -2.72
snR48snR48 TY4B-JP47024 1803 aa-1.94□□□□□ -2.72
snR48snR48 TY1B-HO13535 1793 aa-1.94□□□□□ -2.72
snR48snR48 CBF1P17106 351 aa-1.94□□□□□ -2.72
snR48snR48 EMP24P32803 203 aaKnown RBP-1.94□□□□□ -2.72
snR48snR48 AIM4P38305 123 aaPredicted RBP-1.94□□□□□ -2.72
snR48snR48 YBR072C-AQ3E794 53 aa-1.94□□□□□ -2.72
snR48snR48 UBR1P19812 1950 aa-1.95□□□□□ -2.72
snR48snR48 YSF3P0C074 85 aaPredicted RBP-1.95□□□□□ -2.72
snR48snR48 ANB1P19211 157 aa-1.95□□□□□ -2.72
snR48snR48 GPI2P46961 280 aa-1.95□□□□□ -2.72
snR48snR48 NOC4Q06512 552 aaPredicted RBP-1.95□□□□□ -2.72
snR48snR48 RPA12P32529 125 aaKnown RBP-1.96□□□□□ -2.72
snR48snR48 YCL012CQ8J0M4 134 aa-1.96□□□□□ -2.72
snR48snR48 UTP20P35194 2493 aaKnown RBP-1.96□□□□□ -2.72
snR48snR48 SUA7P29055 345 aaPredicted RBP-1.97□□□□□ -2.72
snR48snR48 SRX1P36077 127 aa-1.97□□□□□ -2.72
snR48snR48 YHR173CP38864 112 aa-1.97□□□□□ -2.72
snR48snR48 XPT1P47165 209 aa-1.97□□□□□ -2.72
snR48snR48 YGL101WP53144 215 aa-1.97□□□□□ -2.72
snR48snR48 THI74Q04083 370 aa-1.97□□□□□ -2.72
snR48snR48 PFY1P07274 126 aa-1.98□□□□□ -2.73
snR48snR48 MRS4P23500 304 aa-1.98□□□□□ -2.73
snR48snR48 MRPS12P53732 153 aa-1.98□□□□□ -2.73
snR48snR48 LCL1Q02786 101 aa-1.98□□□□□ -2.73
snR48snR48 YDR102CQ03864 110 aa-1.98□□□□□ -2.73
snR48snR48 YRF1-3P0CX14 1859 aa-1.99□□□□□ -2.73
snR48snR48 YRF1-7P0CX15 1859 aa-1.99□□□□□ -2.73
snR48snR48 SRP21P32342 167 aa-1.99□□□□□ -2.73
snR48snR48 MSS2P40990 351 aa-1.99□□□□□ -2.73
snR48snR48 COF1Q03048 143 aaKnown RBP-1.99□□□□□ -2.73
snR48snR48 RPL40AP0CH08 128 aaKnown RBP-2□□□□□ -2.73
snR48snR48 RPL40BP0CH09 128 aaKnown RBP-2□□□□□ -2.73
snR48snR48 MRPS17Q03246 237 aaPredicted RBP-2□□□□□ -2.73
snR48snR48 GRX8Q05926 109 aa-2□□□□□ -2.73
snR48snR48 QCR7P00128 127 aa-2.01□□□□□ -2.73
snR48snR48 UTP11P34247 250 aaPredicted RBP-2.01□□□□□ -2.73
snR48snR48 NVJ1P38881 321 aa-2.01□□□□□ -2.73
snR48snR48 HPT1Q04178 221 aaKnown RBP-2.01□□□□□ -2.73
snR48snR48 ATP19P81451 68 aa-2.02□□□□□ -2.73
snR48snR48 SGF11Q03067 99 aa-2.02□□□□□ -2.73
snR48snR48 PLP1Q04004 230 aa-2.02□□□□□ -2.73
snR48snR48 YLR046CQ12253 270 aa-2.02□□□□□ -2.73
snR48snR48 CCW14O13547 238 aa-2.03□□□□□ -2.73
snR48snR48 ARG80P07249 177 aa-2.03□□□□□ -2.73
snR48snR48 MED11Q99278 115 aa-2.03□□□□□ -2.73
snR48snR48 INO80P53115 1489 aa-2.03□□□□□ -2.73
snR48snR48 COX5BP00425 151 aa-2.04□□□□□ -2.74
snR48snR48 YKR041WP36134 250 aa-2.04□□□□□ -2.74
snR48snR48 ICS3P47034 131 aa-2.04□□□□□ -2.74
snR48snR48 VMA10P48836 114 aaKnown RBP-2.04□□□□□ -2.74
snR48snR48 TMA20P89886 181 aaPredicted RBP-2.05□□□□□ -2.74
snR48snR48 RSF2P46974 1380 aa-2.06□□□□□ -2.74
snR48snR48 YGL193CP53097 103 aa-2.06□□□□□ -2.74
snR48snR48 YOR385WQ08909 290 aa-2.06□□□□□ -2.74
snR48snR48 ATP14Q12349 124 aa-2.06□□□□□ -2.74
snR48snR48 PEX11Q12462 236 aa-2.06□□□□□ -2.74
snR48snR48 YER121WP40076 114 aa-2.07□□□□□ -2.74
snR48snR48 PGA2P53903 129 aa-2.07□□□□□ -2.74
snR48snR48 OCA6Q12454 224 aa-2.07□□□□□ -2.74
snR48snR48 ATP5P09457 212 aa-2.08□□□□□ -2.74
snR48snR48 JAC1P53193 184 aa-2.08□□□□□ -2.74
snR48snR48 YLR296WQ05898 108 aa-2.08□□□□□ -2.74
snR48snR48 FYV5P25585 152 aa-2.09□□□□□ -2.74
snR48snR48 RRT7Q07829 113 aa-2.09□□□□□ -2.74
snR48snR48 YGR240C-AQ3E786 66 aa-2.09□□□□□ -2.74
snR48snR48 TY4B-HP0C2J7 1802 aa-2.1□□□□□ -2.74
snR48snR48 SFT2P38166 215 aa-2.1□□□□□ -2.75
snR48snR48 YCL001W-AP87012 153 aa-2.1□□□□□ -2.75
snR48snR48 YPL067CQ02754 198 aa-2.1□□□□□ -2.75
snR48snR48 SNO1Q03144 224 aa-2.1□□□□□ -2.75
snR48snR48 GAT4P40569 121 aa-2.11□□□□□ -2.75
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms