RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W YCL001W-BQ96VH2 84 aa4.48□□□□□ -1.69
HFI1YPL254W VPS63O13549 108 aa4.47□□□□□ -1.69
HFI1YPL254W SOD1P00445 154 aaKnown RBP4.47□□□□□ -1.69
HFI1YPL254W RPL9AP05738 191 aaKnown RBP4.47□□□□□ -1.69
HFI1YPL254W TCA17P32613 152 aa4.47□□□□□ -1.69
HFI1YPL254W YOX1P34161 385 aa4.47□□□□□ -1.69
HFI1YPL254W RPB11P38902 120 aa4.47□□□□□ -1.69
HFI1YPL254W CYB5P40312 120 aa4.47□□□□□ -1.69
HFI1YPL254W YJL028WP47062 111 aa4.47□□□□□ -1.69
HFI1YPL254W SAE3P89114 91 aa4.47□□□□□ -1.69
HFI1YPL254W LIP2Q06005 328 aa4.47□□□□□ -1.69
HFI1YPL254W YOR029WQ12243 111 aa4.47□□□□□ -1.69
HFI1YPL254W YPS3Q12303 508 aa4.47□□□□□ -1.69
HFI1YPL254W YGL258W-AQ3E740 77 aa4.47□□□□□ -1.69
HFI1YPL254W IRA2P19158 3079 aa4.47□□□□□ -1.69
HFI1YPL254W DFR1P07807 211 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
HFI1YPL254W ATP5P09457 212 aa4.46□□□□□ -1.7
HFI1YPL254W PIR5P46999 287 aa4.46□□□□□ -1.7
HFI1YPL254W CPD1P53314 239 aa4.46□□□□□ -1.7
HFI1YPL254W RPL39P04650 51 aa4.45□□□□□ -1.7
HFI1YPL254W HEM4P06174 275 aa4.45□□□□□ -1.7
HFI1YPL254W SEC4P07560 215 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W NOP1P15646 327 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W RAD23P32628 398 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W AME1P38313 324 aa4.45□□□□□ -1.7
HFI1YPL254W GLC8P41818 229 aa4.45□□□□□ -1.7
HFI1YPL254W RPL9BP51401 191 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W RAV2Q03956 351 aa4.45□□□□□ -1.7
HFI1YPL254W TPT1Q12272 230 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W YDL085C-AQ3E7B7 68 aaKnown RBP4.45□□□□□ -1.7
HFI1YPL254W QRI5P32344 111 aa4.44□□□□□ -1.7
HFI1YPL254W MIX23P38162 196 aa4.44□□□□□ -1.7
HFI1YPL254W TEM1P38987 245 aa4.44□□□□□ -1.7
HFI1YPL254W TOM7P53507 60 aa4.44□□□□□ -1.7
HFI1YPL254W TIM10P87108 93 aa4.44□□□□□ -1.7
HFI1YPL254W MCH1Q07376 486 aa4.44□□□□□ -1.7
HFI1YPL254W GAT3Q07928 141 aa4.44□□□□□ -1.7
HFI1YPL254W PIS1P06197 220 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W TOM40P23644 387 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W ACP1P32463 125 aa4.43□□□□□ -1.7
HFI1YPL254W GSP1P32835 219 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W GSP2P32836 220 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W CPR5P35176 225 aa4.43□□□□□ -1.7
HFI1YPL254W YGP1P38616 354 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W YFL051CP43552 160 aa4.43□□□□□ -1.7
HFI1YPL254W TDA4P47153 279 aa4.43□□□□□ -1.7
HFI1YPL254W YMR317WQ04893 1140 aa4.43□□□□□ -1.7
HFI1YPL254W FIT2Q08906 153 aa4.43□□□□□ -1.7
HFI1YPL254W YMR105W-AQ8TGS8 64 aa4.43□□□□□ -1.7
HFI1YPL254W IRA1P18963 3092 aa4.43□□□□□ -1.7
HFI1YPL254W FZF1P32805 299 aa4.43□□□□□ -1.7
HFI1YPL254W YKL187CP34231 750 aa4.43□□□□□ -1.7
HFI1YPL254W PAU16P35994 123 aa4.43□□□□□ -1.7
HFI1YPL254W LSM2P38203 95 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W YHR173CP38864 112 aa4.43□□□□□ -1.7
HFI1YPL254W YAR068WP39564 161 aa4.43□□□□□ -1.7
HFI1YPL254W PRE5P40302 234 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W RPA43P46669 326 aa4.43□□□□□ -1.7
HFI1YPL254W SDS23P53172 527 aa4.43□□□□□ -1.7
HFI1YPL254W YOL024WQ08172 172 aa4.43□□□□□ -1.7
HFI1YPL254W CSM4Q08955 156 aa4.43□□□□□ -1.7
HFI1YPL254W RPS22BQ3E7Y3 130 aaKnown RBP4.43□□□□□ -1.7
HFI1YPL254W SCS22Q6Q595 175 aa4.43□□□□□ -1.7
HFI1YPL254W HTB1P02293 131 aaKnown RBP4.42□□□□□ -1.7
HFI1YPL254W RPL31AP0C2H8 113 aaKnown RBP4.42□□□□□ -1.7
HFI1YPL254W RPL31BP0C2H9 113 aaKnown RBP4.42□□□□□ -1.7
HFI1YPL254W HSP12P22943 109 aaKnown RBP4.42□□□□□ -1.7
HFI1YPL254W DOG1P38774 246 aa4.42□□□□□ -1.7
HFI1YPL254W CTR2P38865 189 aa4.42□□□□□ -1.7
HFI1YPL254W YGL260WP53056 76 aa4.42□□□□□ -1.7
HFI1YPL254W MSC3Q05812 728 aa4.42□□□□□ -1.7
HFI1YPL254W NDE2Q07500 545 aa4.42□□□□□ -1.7
HFI1YPL254W LDB16P25587 256 aa4.41□□□□□ -1.7
HFI1YPL254W YCR022CP25620 114 aa4.41□□□□□ -1.7
HFI1YPL254W ZRT1P32804 376 aa4.41□□□□□ -1.7
HFI1YPL254W YKL102CP34249 101 aa4.41□□□□□ -1.7
HFI1YPL254W DOG2P38773 246 aa4.41□□□□□ -1.7
HFI1YPL254W BDH1P39714 382 aa4.41□□□□□ -1.7
HFI1YPL254W YER188WP40103 239 aa4.41□□□□□ -1.7
HFI1YPL254W SAS2P40963 338 aa4.41□□□□□ -1.7
HFI1YPL254W YGR018CP53211 109 aa4.41□□□□□ -1.7
HFI1YPL254W CRZ1P53968 678 aa4.41□□□□□ -1.7
HFI1YPL254W YDL157CQ12082 118 aa4.41□□□□□ -1.7
HFI1YPL254W HMRA1P0CY11 126 aa4.4□□□□□ -1.71
HFI1YPL254W ATP10P18496 279 aa4.4□□□□□ -1.71
HFI1YPL254W YNL200CP40165 246 aaKnown RBP4.4□□□□□ -1.71
HFI1YPL254W GIM5Q04493 163 aa4.4□□□□□ -1.71
HFI1YPL254W RPL23AP0CX41 137 aaKnown RBP4.39□□□□□ -1.71
HFI1YPL254W RPL23BP0CX42 137 aaKnown RBP4.39□□□□□ -1.71
HFI1YPL254W HAP3P13434 144 aa4.39□□□□□ -1.71
HFI1YPL254W PMU1P36069 295 aa4.39□□□□□ -1.71
HFI1YPL254W LST8P41318 303 aa4.39□□□□□ -1.71
HFI1YPL254W YJL118WP47022 219 aa4.39□□□□□ -1.71
HFI1YPL254W SSU72P53538 206 aaPredicted RBP4.39□□□□□ -1.71
HFI1YPL254W ATP19P81451 68 aa4.39□□□□□ -1.71
HFI1YPL254W SED1Q01589 338 aa4.39□□□□□ -1.71
HFI1YPL254W ARC18Q05933 178 aaKnown RBP4.39□□□□□ -1.71
HFI1YPL254W WIP1Q2V2P8 89 aa4.39□□□□□ -1.71
HFI1YPL254W RPS23AP0CX29 145 aaKnown RBP4.38□□□□□ -1.71
HFI1YPL254W RPS23BP0CX30 145 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms