RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	HTB1	P02293	131 aa	Known RBP	4.6	□□□□□ -1.67
RBD2	YPL246C	QRI5	P32344	111 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	YKR045C	P36138	183 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	LSM2	P38203	95 aa	Known RBP	4.6	□□□□□ -1.67
RBD2	YPL246C	YBR220C	P38318	560 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	YGP1	P38616	354 aa	Known RBP	4.6	□□□□□ -1.67
RBD2	YPL246C	BDH1	P39714	382 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	YJL213W	P40896	331 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	TOM7	P53507	60 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	DUG3	P53871	357 aa		4.6	□□□□□ -1.67
RBD2	YPL246C	SEC4	P07560	215 aa	Known RBP	4.59	□□□□□ -1.67
RBD2	YPL246C	ATP10	P18496	279 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	FZF1	P32805	299 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	GSP1	P32835	219 aa	Known RBP	4.59	□□□□□ -1.67
RBD2	YPL246C	GSP2	P32836	220 aa	Known RBP	4.59	□□□□□ -1.67
RBD2	YPL246C	HOT13	P36078	116 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	YHR173C	P38864	112 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	SAS2	P40963	338 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	LST8	P41318	303 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	YGL260W	P53056	76 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	YNL234W	P53857	426 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	YPR014C	Q6B0W2	109 aa		4.59	□□□□□ -1.67
RBD2	YPL246C	YBR056W-A	I2HB52	66 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RBD2	YPL246C	MDM10	P18409	493 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	DAL80	P26343	269 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	ACP1	P32463	125 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	FPR2	P32472	135 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	TCA17	P32613	152 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	YKL102C	P34249	101 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	DOG2	P38773	246 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	DOG1	P38774	246 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	RPB11	P38902	120 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	GAT2	P40209	560 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	SSU72	P53538	206 aa	Predicted RBP	4.58	□□□□□ -1.68
RBD2	YPL246C	ATP19	P81451	68 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	SNA4	Q07549	140 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	NAT5	Q08689	176 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	POM33	Q12164	279 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	FYV7	Q12247	151 aa		4.58	□□□□□ -1.68
RBD2	YPL246C	ATP5	P09457	212 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	AQY1	P0CD91	305 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	TIR1	P10863	254 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	YKL187C	P34231	750 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	SOR1	P35497	357 aa	Known RBP	4.57	□□□□□ -1.68
RBD2	YPL246C	ADH5	P38113	351 aa	Known RBP	4.57	□□□□□ -1.68
RBD2	YPL246C	YBL071C	P38185	102 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	ICS2	P38284	255 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	CSH1	P38287	376 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	ECM14	P38836	430 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	RPA43	P46669	326 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	NDE2	Q07500	545 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	YDL218W	Q07629	317 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	SOR2	Q07786	357 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	AYT1	Q12226	474 aa		4.57	□□□□□ -1.68
RBD2	YPL246C	TPT1	Q12272	230 aa	Known RBP	4.57	□□□□□ -1.68
RBD2	YPL246C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.57	□□□□□ -1.68
RBD2	YPL246C	HMRA1	P0CY11	126 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	HSP12	P22943	109 aa	Known RBP	4.56	□□□□□ -1.68
RBD2	YPL246C	PAU16	P35994	123 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	PMU1	P36069	295 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	SFT2	P38166	215 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	TEM1	P38987	245 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	TDA4	P47153	279 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	SDS23	P53172	527 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	HST4	P53688	370 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	MIX17	Q03667	156 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	CSM4	Q08955	156 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	ATO3	Q12359	275 aa		4.56	□□□□□ -1.68
RBD2	YPL246C	YER190C-B	P0CX94	160 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YEL077W-A	P0CX95	160 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YGR296C-B	P0CX96	160 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YPL283W-B	P0CX97	160 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YPR204C-A	P0CX98	160 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	ZRT1	P32804	376 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	AME1	P38313	324 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	GLE2	P40066	365 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YNL200C	P40165	246 aa	Known RBP	4.55	□□□□□ -1.68
RBD2	YPL246C	YMR141C	P40211	102 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	PRE5	P40302	234 aa	Known RBP	4.55	□□□□□ -1.68
RBD2	YPL246C	WWM1	P43582	211 aa	Known RBP	4.55	□□□□□ -1.68
RBD2	YPL246C	BRP1	P53194	125 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YNL092W	P53934	400 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	GIM5	Q04493	163 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	CSI2	Q08054	341 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YPL278C	Q08990	100 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YCL048W-A	Q2V2Q2	79 aa		4.55	□□□□□ -1.68
RBD2	YPL246C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.55	□□□□□ -1.68
RBD2	YPL246C	MRS1	P07266	363 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	YHR213W	P0CI67	198 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	MRPL31	P14063	131 aa	Predicted RBP	4.54	□□□□□ -1.68
RBD2	YPL246C	YNL046W	P53956	172 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	SAE3	P89114	91 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	MRX11	Q03079	207 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	YOL024W	Q08172	172 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	IRC23	Q08416	157 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	FSF1	Q12029	327 aa	Known RBP	4.54	□□□□□ -1.68
RBD2	YPL246C	YDL157C	Q12082	118 aa		4.54	□□□□□ -1.68
RBD2	YPL246C	RPL23A	P0CX41	137 aa	Known RBP	4.53	□□□□□ -1.68
RBD2	YPL246C	RPL23B	P0CX42	137 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms