RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YGL014C-AP0C5N1 53 aa-0.29□□□□□ -2.46
SGF11YPL047W POR2P40478 281 aa-0.29□□□□□ -2.46
SGF11YPL047W RCF2P53721 224 aa-0.29□□□□□ -2.46
SGF11YPL047W IRC19Q07843 230 aa-0.29□□□□□ -2.46
SGF11YPL047W FIT3Q08907 204 aa-0.29□□□□□ -2.46
SGF11YPL047W YGL041W-AP0C5N3 154 aa-0.3□□□□□ -2.46
SGF11YPL047W FUN14P18411 198 aa-0.3□□□□□ -2.46
SGF11YPL047W MRS4P23500 304 aa-0.3□□□□□ -2.46
SGF11YPL047W PEX34P25584 144 aa-0.3□□□□□ -2.46
SGF11YPL047W SNO1Q03144 224 aa-0.3□□□□□ -2.46
SGF11YPL047W YMR122CQ03879 124 aa-0.3□□□□□ -2.46
SGF11YPL047W PLP1Q04004 230 aa-0.3□□□□□ -2.46
SGF11YPL047W THI74Q04083 370 aa-0.3□□□□□ -2.46
SGF11YPL047W URA2P07259 2214 aaKnown RBP-0.3□□□□□ -2.46
SGF11YPL047W BNI1P41832 1953 aa-0.31□□□□□ -2.46
SGF11YPL047W NHP6AP11632 93 aaKnown RBP-0.31□□□□□ -2.46
SGF11YPL047W YKT6P36015 200 aaKnown RBP-0.31□□□□□ -2.46
SGF11YPL047W SRL3P36167 246 aa-0.31□□□□□ -2.46
SGF11YPL047W YBR013CP38215 129 aa-0.31□□□□□ -2.46
SGF11YPL047W MIC27P50945 234 aa-0.31□□□□□ -2.46
SGF11YPL047W RDI1Q12434 202 aa-0.31□□□□□ -2.46
SGF11YPL047W RME1P32338 300 aaKnown RBP-0.32□□□□□ -2.46
SGF11YPL047W GPI2P46961 280 aa-0.32□□□□□ -2.46
SGF11YPL047W CGR1P53188 120 aa-0.32□□□□□ -2.46
SGF11YPL047W YNL140CP53910 189 aa-0.32□□□□□ -2.46
SGF11YPL047W YNL019CP53975 284 aa-0.32□□□□□ -2.46
SGF11YPL047W ATP5P09457 212 aa-0.33□□□□□ -2.46
SGF11YPL047W DDR48P18899 430 aaKnown RBP-0.33□□□□□ -2.46
SGF11YPL047W YGL101WP53144 215 aa-0.33□□□□□ -2.46
SGF11YPL047W TIM11P81449 96 aaPredicted RBP-0.33□□□□□ -2.46
SGF11YPL047W ATP19P81451 68 aa-0.33□□□□□ -2.46
SGF11YPL047W COA4Q05809 96 aa-0.33□□□□□ -2.46
SGF11YPL047W YPR153WQ06537 140 aa-0.33□□□□□ -2.46
SGF11YPL047W FAS2P19097 1887 aaKnown RBP-0.34□□□□□ -2.46
SGF11YPL047W TRR1P29509 319 aaKnown RBP-0.34□□□□□ -2.46
SGF11YPL047W UTP11P34247 250 aaPredicted RBP-0.34□□□□□ -2.46
SGF11YPL047W HSK3P69852 69 aa-0.34□□□□□ -2.46
SGF11YPL047W YLR050CQ12155 161 aaKnown RBP-0.34□□□□□ -2.46
SGF11YPL047W PEX11Q12462 236 aa-0.34□□□□□ -2.46
SGF11YPL047W YOL164W-AQ3E7A5 60 aa-0.34□□□□□ -2.46
SGF11YPL047W SCS22Q6Q595 175 aa-0.34□□□□□ -2.46
SGF11YPL047W MED11Q99278 115 aa-0.34□□□□□ -2.46
SGF11YPL047W SAC3P46674 1301 aa-0.35□□□□□ -2.46
SGF11YPL047W RAD51P25454 400 aa-0.35□□□□□ -2.47
SGF11YPL047W LST8P41318 303 aa-0.35□□□□□ -2.47
SGF11YPL047W YFR035CP43608 114 aa-0.35□□□□□ -2.47
SGF11YPL047W YCL001W-AP87012 153 aa-0.35□□□□□ -2.47
SGF11YPL047W TMA20P89886 181 aaPredicted RBP-0.35□□□□□ -2.47
SGF11YPL047W ARL3Q02804 198 aa-0.35□□□□□ -2.47
SGF11YPL047W GRE1Q08969 168 aa-0.35□□□□□ -2.47
SGF11YPL047W MYO1P08964 1928 aa-0.35□□□□□ -2.47
SGF11YPL047W SPA2P23201 1466 aaKnown RBP-0.35□□□□□ -2.47
SGF11YPL047W CMD1P06787 147 aaKnown RBP-0.36□□□□□ -2.47
SGF11YPL047W NMT1P14743 455 aa-0.36□□□□□ -2.47
SGF11YPL047W ATP7P30902 174 aa-0.36□□□□□ -2.47
SGF11YPL047W AUA1P32450 94 aa-0.36□□□□□ -2.47
SGF11YPL047W SRP14P38985 146 aa-0.36□□□□□ -2.47
SGF11YPL047W YJR128WP47162 119 aa-0.36□□□□□ -2.47
SGF11YPL047W YPD1Q07688 167 aa-0.36□□□□□ -2.47
SGF11YPL047W COX5BP00425 151 aa-0.37□□□□□ -2.47
SGF11YPL047W RPL40AP0CH08 128 aaKnown RBP-0.37□□□□□ -2.47
SGF11YPL047W RPL40BP0CH09 128 aaKnown RBP-0.37□□□□□ -2.47
SGF11YPL047W YHR213WP0CI67 198 aa-0.37□□□□□ -2.47
SGF11YPL047W MRPL31P14063 131 aaPredicted RBP-0.37□□□□□ -2.47
SGF11YPL047W SRX1P36077 127 aa-0.37□□□□□ -2.47
SGF11YPL047W AIM4P38305 123 aaPredicted RBP-0.37□□□□□ -2.47
SGF11YPL047W CWC21Q03375 135 aaKnown RBP-0.37□□□□□ -2.47
SGF11YPL047W YLR046CQ12253 270 aa-0.37□□□□□ -2.47
SGF11YPL047W HUT1Q12520 339 aa-0.37□□□□□ -2.47
SGF11YPL047W APA2P22108 325 aa-0.38□□□□□ -2.47
SGF11YPL047W YEA6P39953 335 aa-0.38□□□□□ -2.47
SGF11YPL047W DLS1P40366 167 aa-0.38□□□□□ -2.47
SGF11YPL047W ORM1P53224 222 aa-0.38□□□□□ -2.47
SGF11YPL047W YLR194CQ05777 254 aa-0.38□□□□□ -2.47
SGF11YPL047W UBI4P0CG63 381 aaKnown RBP-0.39□□□□□ -2.47
SGF11YPL047W ANB1P19211 157 aa-0.39□□□□□ -2.47
SGF11YPL047W BUB2P26448 306 aaPredicted RBP-0.39□□□□□ -2.47
SGF11YPL047W YER181CP40097 107 aa-0.39□□□□□ -2.47
SGF11YPL047W LSM3P57743 89 aaKnown RBP-0.39□□□□□ -2.47
SGF11YPL047W RRT7Q07829 113 aa-0.39□□□□□ -2.47
SGF11YPL047W YDR010CQ12426 110 aa-0.39□□□□□ -2.47
SGF11YPL047W YSF3P0C074 85 aaPredicted RBP-0.4□□□□□ -2.47
SGF11YPL047W FYV5P25585 152 aa-0.4□□□□□ -2.47
SGF11YPL047W YER121WP40076 114 aa-0.4□□□□□ -2.47
SGF11YPL047W FIP1P45976 327 aa-0.4□□□□□ -2.47
SGF11YPL047W YPL067CQ02754 198 aa-0.4□□□□□ -2.47
SGF11YPL047W PFY1P07274 126 aa-0.41□□□□□ -2.48
SGF11YPL047W RPL30P14120 105 aaKnown RBP-0.41□□□□□ -2.48
SGF11YPL047W MRPL11P36521 249 aaPredicted RBP-0.41□□□□□ -2.48
SGF11YPL047W PHB1P40961 287 aa-0.41□□□□□ -2.48
SGF11YPL047W YIP3P53633 176 aa-0.41□□□□□ -2.48
SGF11YPL047W COF1Q03048 143 aaKnown RBP-0.41□□□□□ -2.48
SGF11YPL047W LDB18Q07887 179 aa-0.41□□□□□ -2.48
SGF11YPL047W NAT5Q08689 176 aa-0.41□□□□□ -2.48
SGF11YPL047W TY4B-JP47024 1803 aa-0.42□□□□□ -2.48
SGF11YPL047W RPS1BP23248 255 aaKnown RBP-0.42□□□□□ -2.48
SGF11YPL047W EMP24P32803 203 aaKnown RBP-0.42□□□□□ -2.48
SGF11YPL047W EGD2P38879 174 aaKnown RBP-0.42□□□□□ -2.48
SGF11YPL047W SEC72P39742 193 aaKnown RBP-0.42□□□□□ -2.48
SGF11YPL047W YGL193CP53097 103 aa-0.42□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 180.2 ms