RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C FZF1P32805 299 aa6.13□□□□□ -1.43
RUP1YOR138C UME6P39001 836 aa6.13□□□□□ -1.43
RUP1YOR138C HAC1P41546 238 aa6.13□□□□□ -1.43
RUP1YOR138C YGL118CP53132 145 aa6.13□□□□□ -1.43
RUP1YOR138C RPL23AP0CX41 137 aaKnown RBP6.13□□□□□ -1.43
RUP1YOR138C RPL23BP0CX42 137 aaKnown RBP6.13□□□□□ -1.43
RUP1YOR138C YBL071CP38185 102 aa6.13□□□□□ -1.43
RUP1YOR138C LSM2P38203 95 aaKnown RBP6.13□□□□□ -1.43
RUP1YOR138C DOG2P38773 246 aa6.13□□□□□ -1.43
RUP1YOR138C THG1P53215 237 aaKnown RBP6.13□□□□□ -1.43
RUP1YOR138C ARC18Q05933 178 aaKnown RBP6.13□□□□□ -1.43
RUP1YOR138C FPR2P32472 135 aa6.12□□□□□ -1.43
RUP1YOR138C YNL200CP40165 246 aaKnown RBP6.12□□□□□ -1.43
RUP1YOR138C MSL1P40567 111 aaPredicted RBP6.12□□□□□ -1.43
RUP1YOR138C YGR151CP53287 111 aa6.12□□□□□ -1.43
RUP1YOR138C CRZ1P53968 678 aa6.12□□□□□ -1.43
RUP1YOR138C YPL162CQ12042 273 aa6.12□□□□□ -1.43
RUP1YOR138C YDR215CQ12240 137 aa6.12□□□□□ -1.43
RUP1YOR138C RPS23AP0CX29 145 aaKnown RBP6.11□□□□□ -1.43
RUP1YOR138C RPS23BP0CX30 145 aa6.11□□□□□ -1.43
RUP1YOR138C ATP10P18496 279 aa6.11□□□□□ -1.43
RUP1YOR138C BDH1P39714 382 aa6.11□□□□□ -1.43
RUP1YOR138C YER188WP40103 239 aa6.11□□□□□ -1.43
RUP1YOR138C MIC26P50087 233 aa6.11□□□□□ -1.43
RUP1YOR138C YGL230CP53074 147 aa6.11□□□□□ -1.43
RUP1YOR138C YNR064CP53750 290 aa6.11□□□□□ -1.43
RUP1YOR138C GAT3Q07928 141 aa6.11□□□□□ -1.43
RUP1YOR138C FSF1Q12029 327 aaKnown RBP6.11□□□□□ -1.43
RUP1YOR138C YMR105W-AQ8TGS8 64 aa6.11□□□□□ -1.43
RUP1YOR138C SEN1Q00416 2231 aaKnown RBP6.11□□□□□ -1.43
RUP1YOR138C TIR1P10863 254 aa6.11□□□□□ -1.43
RUP1YOR138C SEC11P15367 167 aa6.11□□□□□ -1.43
RUP1YOR138C YCR022CP25620 114 aa6.11□□□□□ -1.43
RUP1YOR138C ELF1P36053 145 aa6.11□□□□□ -1.43
RUP1YOR138C SFT2P38166 215 aa6.11□□□□□ -1.43
RUP1YOR138C YFL054CP43549 646 aa6.11□□□□□ -1.43
RUP1YOR138C IRA2P19158 3079 aa6.11□□□□□ -1.43
RUP1YOR138C ADE8P04161 214 aa6.1□□□□□ -1.43
RUP1YOR138C YPT10P38146 199 aa6.1□□□□□ -1.43
RUP1YOR138C ICS2P38284 255 aa6.1□□□□□ -1.43
RUP1YOR138C CSH1P38287 376 aa6.1□□□□□ -1.43
RUP1YOR138C LST8P41318 303 aa6.1□□□□□ -1.43
RUP1YOR138C YJL118WP47022 219 aa6.1□□□□□ -1.43
RUP1YOR138C YGR018CP53211 109 aa6.1□□□□□ -1.43
RUP1YOR138C MRX11Q03079 207 aa6.1□□□□□ -1.43
RUP1YOR138C COX2P00410 251 aa6.09□□□□□ -1.43
RUP1YOR138C MRPL31P14063 131 aaPredicted RBP6.09□□□□□ -1.43
RUP1YOR138C RPI1P23250 407 aaKnown RBP6.09□□□□□ -1.43
RUP1YOR138C YCR007CP25354 239 aa6.09□□□□□ -1.43
RUP1YOR138C LDB16P25587 256 aa6.09□□□□□ -1.43
RUP1YOR138C YFL051CP43552 160 aa6.09□□□□□ -1.43
RUP1YOR138C YFR045WP43617 309 aa6.09□□□□□ -1.43
RUP1YOR138C MRS1P07266 363 aa6.08□□□□□ -1.44
RUP1YOR138C YBR220CP38318 560 aa6.08□□□□□ -1.44
RUP1YOR138C CTR2P38865 189 aa6.08□□□□□ -1.44
RUP1YOR138C POP3P53833 195 aaPredicted RBP6.08□□□□□ -1.44
RUP1YOR138C UPS3Q04006 179 aa6.08□□□□□ -1.44
RUP1YOR138C SOR1P35497 357 aaKnown RBP6.08□□□□□ -1.44
RUP1YOR138C MOH1P38191 138 aa6.08□□□□□ -1.44
RUP1YOR138C RPF1P38805 295 aaKnown RBP6.08□□□□□ -1.44
RUP1YOR138C PAU7P39545 55 aa6.08□□□□□ -1.44
RUP1YOR138C DAD4P69851 72 aa6.08□□□□□ -1.44
RUP1YOR138C SDH7Q04401 133 aa6.08□□□□□ -1.44
RUP1YOR138C DPP1Q05521 289 aa6.08□□□□□ -1.44
RUP1YOR138C SOR2Q07786 357 aa6.08□□□□□ -1.44
RUP1YOR138C AYT1Q12226 474 aa6.08□□□□□ -1.44
RUP1YOR138C ATO3Q12359 275 aa6.08□□□□□ -1.44
RUP1YOR138C MTR2P34232 184 aaKnown RBP6.07□□□□□ -1.44
RUP1YOR138C COX16P47081 118 aa6.07□□□□□ -1.44
RUP1YOR138C BRP1P53194 125 aa6.07□□□□□ -1.44
RUP1YOR138C RUB1Q03919 77 aa6.07□□□□□ -1.44
RUP1YOR138C IRC25Q07951 179 aa6.07□□□□□ -1.44
RUP1YOR138C TIM18Q08749 192 aa6.07□□□□□ -1.44
RUP1YOR138C MDM10P18409 493 aa6.06□□□□□ -1.44
RUP1YOR138C FEN2P25621 512 aaKnown RBP6.06□□□□□ -1.44
RUP1YOR138C TIR2P33890 251 aa6.06□□□□□ -1.44
RUP1YOR138C YMR141CP40211 102 aa6.06□□□□□ -1.44
RUP1YOR138C HST4P53688 370 aa6.06□□□□□ -1.44
RUP1YOR138C SWT21P53873 357 aaPredicted RBP6.06□□□□□ -1.44
RUP1YOR138C GRH1Q04410 372 aaKnown RBP6.06□□□□□ -1.44
RUP1YOR138C HTB2P02294 131 aa6.06□□□□□ -1.44
RUP1YOR138C ALG14P38242 237 aa6.06□□□□□ -1.44
RUP1YOR138C GZF3P42944 551 aaKnown RBP6.06□□□□□ -1.44
RUP1YOR138C YGR017WP53210 297 aa6.06□□□□□ -1.44
RUP1YOR138C SED1Q01589 338 aa6.06□□□□□ -1.44
RUP1YOR138C RXT3Q07458 294 aa6.06□□□□□ -1.44
RUP1YOR138C DAD1Q12248 94 aa6.06□□□□□ -1.44
RUP1YOR138C YFL068WP0CX99 160 aa6.05□□□□□ -1.44
RUP1YOR138C YLL066W-AP0CY00 160 aa6.05□□□□□ -1.44
RUP1YOR138C YLL067W-AP0CY01 160 aa6.05□□□□□ -1.44
RUP1YOR138C YKR070WP36151 352 aaKnown RBP6.05□□□□□ -1.44
RUP1YOR138C YER121WP40076 114 aa6.05□□□□□ -1.44
RUP1YOR138C YPI1P43587 155 aa6.05□□□□□ -1.44
RUP1YOR138C YLR050CQ12155 161 aaKnown RBP6.05□□□□□ -1.44
RUP1YOR138C YDL009CQ12210 107 aa6.05□□□□□ -1.44
RUP1YOR138C ADH2P00331 348 aaKnown RBP6.04□□□□□ -1.44
RUP1YOR138C YPR170W-BP0C5R9 85 aa6.04□□□□□ -1.44
RUP1YOR138C PRE1P22141 198 aaKnown RBP6.04□□□□□ -1.44
RUP1YOR138C GTO3Q04806 366 aa6.04□□□□□ -1.44
RUP1YOR138C PIN2Q12057 282 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms